RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 PRR25Q96S07 402 aa3.31□□□□□ -1.88
PKP4-212ENST00000483881 THAP7Q9BT49 309 aaPredicted RBP3.31□□□□□ -1.88
PKP4-212ENST00000483881 DDX23Q9BUQ8 820 aaKnown RBP3.31□□□□□ -1.88
PKP4-212ENST00000483881 CAPS2Q9BXY5 557 aa3.31□□□□□ -1.88
PKP4-212ENST00000483881 CCDC134Q9H6E4 229 aa3.31□□□□□ -1.88
PKP4-212ENST00000483881 USP29Q9HBJ7 922 aa3.31□□□□□ -1.88
PKP4-212ENST00000483881 CPNE5Q9HCH3 593 aa3.31□□□□□ -1.88
PKP4-212ENST00000483881 ERVK-5Q9HDB9 667 aa3.31□□□□□ -1.88
PKP4-212ENST00000483881 SMYD2Q9NRG4 433 aa3.31□□□□□ -1.88
PKP4-212ENST00000483881 SEMA4GQ9NTN9 838 aa3.31□□□□□ -1.88
PKP4-212ENST00000483881 PDRG1Q9NUG6 133 aa3.31□□□□□ -1.88
PKP4-212ENST00000483881 CPSF2Q9P2I0 782 aaKnown RBP3.31□□□□□ -1.88
PKP4-212ENST00000483881 PI4KBQ9UBF8 816 aa3.31□□□□□ -1.88
PKP4-212ENST00000483881 FZD4Q9ULV1 537 aa3.31□□□□□ -1.88
PKP4-212ENST00000483881 POLR2AP24928 1970 aaKnown RBP3.31□□□□□ -1.88
PKP4-212ENST00000483881 GOLGB1Q14789 3259 aaKnown RBP3.31□□□□□ -1.88
PKP4-212ENST00000483881 ADAMTS7Q9UKP4 1686 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 KDM5CP41229 1560 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 MEGF6O75095 1541 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 ARAP3Q8WWN8 1544 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 WDR7Q9Y4E6 1490 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 SPATA31A5Q5VU36 1347 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 SPATA31A7Q8IWB4 1347 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TBC1D3DA0A087WVF3 549 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TBC1D3IA0A087WXS9 549 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TBC1D3EA0A087X179 549 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TBC1D3KA0A087X1G2 549 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 LINC00854A0A1B0GVQ3 168 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TBC1D3BA6NDS4 549 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TBC1D3FA6NER0 549 aaPredicted RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 DNAJC9-AS1A6NH13 148 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 C2orf81A6NN90 581 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 SMTNL1A8MU46 457 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 VWC2LB2RUY7 222 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TARM1B6A8C7 271 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TBC1D3LB9A6J9 549 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TMEM232C9JQI7 657 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 KIF2AO00139 706 aaPredicted RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 ZNF213O14771 459 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 SPRY2O43597 315 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 ASNA1O43681 348 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 PIP5K1CO60331 668 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 BAG4O95429 457 aaKnown RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 FGFR1OPO95684 399 aaKnown RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 APBB3O95704 486 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TFRCP02786 760 aaKnown RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 PDHA1P08559 390 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TBC1D3HP0C7X1 549 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 RPS2P15880 293 aaKnown RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 NTSR1P30989 418 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 OAZ1P54368 228 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 SH3BGRP55822 239 aaPredicted RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 CYP4A11Q02928 519 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TLE3Q04726 772 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 FOXF2Q12947 444 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 GRIK3Q13003 919 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 MTAPQ13126 283 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TAF12Q16514 161 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 SLC4A8Q2Y0W8 1093 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 AASDHQ4L235 1098 aaPredicted RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 AP1ARQ63HQ0 302 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 FAM90A2PQ658T7 463 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TBC1D3GQ6DHY5 549 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TBC1D3CQ6IPX1 549 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 GALNT17Q6IS24 598 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 ANO7Q6IWH7 933 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 FBXO42Q6P3S6 717 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 KIRREL2Q6UWL6 708 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 CCDC80Q76M96 950 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 ERC1Q8IUD2 1116 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TBC1D3Q8IZP1 549 aaPredicted RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 DCLK2Q8N568 766 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 SIMC1Q8NDZ2 872 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 SPPL3Q8TCT6 385 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 HMGB4Q8WW32 186 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 SARAFQ96BY9 339 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 HVCN1Q96D96 273 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 THOC1Q96FV9 657 aaKnown RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 RBM17Q96I25 401 aaKnown RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 RSRC1Q96IZ7 334 aaKnown RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 TSGA13Q96PP4 275 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 TRAPPC9Q96Q05 1148 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 SEMA4CQ9C0C4 833 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 CIPCQ9C0C6 399 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 MAGEH1Q9H213 219 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 CCDC68Q9H2F9 335 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 PABPC3Q9H361 631 aaKnown RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 TAF1DQ9H5J8 278 aaPredicted RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 CDCP1Q9H5V8 836 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 EPS8L2Q9H6S3 715 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 ELAC1Q9H777 363 aaKnown RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 SFXN1Q9H9B4 322 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 SAGE1Q9NXZ1 904 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 C9orf78Q9NZ63 289 aaPredicted RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 CWC15Q9P013 229 aaKnown RBP3.3□□□□□ -1.88
PKP4-212ENST00000483881 IGSF9Q9P2J2 1179 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.3□□□□□ -1.88
PKP4-212ENST00000483881 RSPH14Q9UHP6 348 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 ZNF112Q9UJU3 913 aa3.3□□□□□ -1.88
PKP4-212ENST00000483881 GTF2A1LQ9UNN4 478 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms