RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 H3BRJ5 948 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 RASA4O43374 803 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 IL1BP01584 269 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 IGLV3-19P01714 112 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 ERCC2P18074 760 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 CYLC1P35663 651 aaPredicted RBP13.68□□□□□ -0.22
SSR1-208ENST00000483409 MPLP40238 635 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 MAGEA1P43355 309 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 SERPINH1P50454 418 aaKnown RBP13.68□□□□□ -0.22
SSR1-208ENST00000483409 CLCN6P51797 869 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 ZBTB16Q05516 673 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 MESDQ14696 234 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 CST6Q15828 149 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 DPYSL2Q16555 572 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 HADHQ16836 314 aaKnown RBP13.68□□□□□ -0.22
SSR1-208ENST00000483409 TTC31Q49AM3 519 aaPredicted RBP13.68□□□□□ -0.22
SSR1-208ENST00000483409 C22orf39Q6P5X5 142 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 CYP2U1Q7Z449 544 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 CCDC170Q8IYT3 715 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 NETO2Q8NC67 525 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 GANCQ8TET4 914 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 TEKT4Q8WW24 435 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 RFFLQ8WZ73 363 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 OR8D1Q8WZ84 308 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 CELF6Q96J87 481 aaKnown RBP13.68□□□□□ -0.22
SSR1-208ENST00000483409 HSPA12BQ96MM6 686 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 GPR174Q9BXC1 333 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 KLC2Q9H0B6 622 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 TNKS2Q9H2K2 1166 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 PABPC3Q9H361 631 aaKnown RBP13.68□□□□□ -0.22
SSR1-208ENST00000483409 SMOC1Q9H4F8 434 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 KLHL11Q9NVR0 708 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 WSB2Q9NYS7 404 aaPredicted RBP13.68□□□□□ -0.22
SSR1-208ENST00000483409 INTUQ9ULD6 942 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 FCF1Q9Y324 198 aaKnown RBP13.68□□□□□ -0.22
SSR1-208ENST00000483409 DOCK9Q9BZ29 2069 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 ANKRD36A6QL64 1941 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 ATXN2Q99700 1313 aaKnown RBP13.67□□□□□ -0.22
SSR1-208ENST00000483409 A0A1W2PP55 124 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 BUB1O43683 1085 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 KDELR3O43731 214 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 LCA5LO95447 670 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 CD160O95971 181 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 TGM1P22735 817 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 FECHP22830 423 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 OXTRP30559 389 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 SLC8A1P32418 973 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 ARL4AP40617 200 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 DNA2P51530 1060 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 ZNF135P52742 658 aaPredicted RBP13.67□□□□□ -0.22
SSR1-208ENST00000483409 METAP1P53582 386 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 TAS2R40P59535 323 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 DPYSQ14117 519 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 KRT81Q14533 505 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 POM121L1PQ3SYA9 428 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 PARP15Q460N3 678 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 LYSMD4Q5XG99 296 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 POLNQ7Z5Q5 900 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 TMTC1Q8IUR5 882 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 SLC41A1Q8IVJ1 513 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 RHOT2Q8IXI1 618 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 UMODL1-AS1Q8N2C9 162 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 NPWQ8N729 165 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 PCDH18Q9HCL0 1135 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 SEMA4GQ9NTN9 838 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 FBXL12Q9NXK8 326 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 SERGEFQ9UGK8 458 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 SARDHQ9UL12 918 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 TFR2Q9UP52 801 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 PCDHGA5Q9Y5G8 931 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 PCDHA13Q9Y5I0 950 aa13.67□□□□□ -0.22
SSR1-208ENST00000483409 ZNF292O60281 2723 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 BCLAF3A2AJT9 711 aaKnown RBP13.66□□□□□ -0.22
SSR1-208ENST00000483409 LRP3O75074 770 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 ZNF821O75541 412 aaPredicted RBP13.66□□□□□ -0.22
SSR1-208ENST00000483409 RNASEH2AO75792 299 aaKnown RBP13.66□□□□□ -0.22
SSR1-208ENST00000483409 MTA2O94776 668 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 ADH1BP00325 375 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 C7P10643 843 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 AMPD1P23109 780 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 ITPKAP23677 461 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 ACSL1P33121 698 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 MAN1A1P33908 653 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 RECQLP46063 649 aaPredicted RBP13.66□□□□□ -0.22
SSR1-208ENST00000483409 HCAR3P49019 387 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 CDH6P55285 790 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 GEMIN4P57678 1058 aaKnown RBP13.66□□□□□ -0.22
SSR1-208ENST00000483409 YBEYP58557 167 aaPredicted RBP13.66□□□□□ -0.22
SSR1-208ENST00000483409 ZNF33AQ06730 810 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 SLC20A2Q08357 652 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 MMRN1Q13201 1228 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 SERINC3Q13530 473 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 SPA17Q15506 151 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 ATP13A4Q4VNC1 1196 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 SPDYCQ5MJ68 293 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 DSG4Q86SJ6 1040 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 HDDC3Q8N4P3 179 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 AADATQ8N5Z0 425 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 CHST14Q8NCH0 376 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 OR2A12Q8NGT7 310 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms