RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 GRAMD1CQ8IYS0 662 aa15.35■□□□□ 0.05
HDAC6-224ENST00000481929 FBXO39Q8N4B4 442 aa15.35■□□□□ 0.05
HDAC6-224ENST00000481929 ZSCAN1Q8NBB4 408 aa15.35■□□□□ 0.05
HDAC6-224ENST00000481929 FBXL13Q8NEE6 735 aa15.35■□□□□ 0.05
HDAC6-224ENST00000481929 LMX1AQ8TE12 382 aa15.35■□□□□ 0.05
HDAC6-224ENST00000481929 RNF34Q969K3 372 aa15.35■□□□□ 0.05
HDAC6-224ENST00000481929 SLC39A13Q96H72 371 aa15.35■□□□□ 0.05
HDAC6-224ENST00000481929 ZSCAN16Q9H4T2 348 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-224ENST00000481929 EPB41L5Q9HCM4 733 aa15.35■□□□□ 0.05
HDAC6-224ENST00000481929 DYRK4Q9NR20 520 aa15.35■□□□□ 0.05
HDAC6-224ENST00000481929 GPR27Q9NS67 375 aa15.35■□□□□ 0.05
HDAC6-224ENST00000481929 RAB20Q9NX57 234 aa15.35■□□□□ 0.05
HDAC6-224ENST00000481929 SEPT10Q9P0V9 454 aa15.35■□□□□ 0.05
HDAC6-224ENST00000481929 XPO7Q9UIA9 1087 aaKnown RBP15.35■□□□□ 0.05
HDAC6-224ENST00000481929 TRAF3IP3Q9Y228 551 aa15.35■□□□□ 0.05
HDAC6-224ENST00000481929 FARP1Q9Y4F1 1045 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-224ENST00000481929 SPTY2D1-AS1A0A0U1RR47 76 aa15.34■□□□□ 0.05
HDAC6-224ENST00000481929 F5H5T6 163 aa15.34■□□□□ 0.05
HDAC6-224ENST00000481929 O00370 1275 aa15.34■□□□□ 0.05
HDAC6-224ENST00000481929 KPNA3O00505 521 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-224ENST00000481929 LIPCP11150 499 aa15.34■□□□□ 0.05
HDAC6-224ENST00000481929 VDRP11473 427 aa15.34■□□□□ 0.05
HDAC6-224ENST00000481929 UGT1A5P35504 534 aa15.34■□□□□ 0.05
HDAC6-224ENST00000481929 C4orf17Q53FE4 359 aa15.34■□□□□ 0.05
HDAC6-224ENST00000481929 MANEAQ5SRI9 462 aa15.34■□□□□ 0.05
HDAC6-224ENST00000481929 SEL1L3Q68CR1 1132 aa15.34■□□□□ 0.05
HDAC6-224ENST00000481929 CIR1Q86X95 450 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-224ENST00000481929 CCAR2Q8N163 923 aaKnown RBP15.34■□□□□ 0.05
HDAC6-224ENST00000481929 CLEC4CQ8WTT0 213 aa15.34■□□□□ 0.05
HDAC6-224ENST00000481929 EEF2KMTQ96G04 330 aa15.34■□□□□ 0.05
HDAC6-224ENST00000481929 PPP1R9BQ96SB3 815 aa15.34■□□□□ 0.05
HDAC6-224ENST00000481929 CCDC3Q9BQI4 270 aa15.34■□□□□ 0.05
HDAC6-224ENST00000481929 GEMIN8Q9NWZ8 242 aaKnown RBP15.34■□□□□ 0.05
HDAC6-224ENST00000481929 IPO11Q9UI26 975 aaKnown RBP15.34■□□□□ 0.05
HDAC6-224ENST00000481929 ZFR2Q9UPR6 939 aaKnown RBP15.34■□□□□ 0.05
HDAC6-224ENST00000481929 PCDHGA4Q9Y5G9 962 aa15.34■□□□□ 0.05
HDAC6-224ENST00000481929 HS3ST3A1Q9Y663 406 aa15.34■□□□□ 0.05
HDAC6-224ENST00000481929 TCAF2A6NFQ2 919 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 GABBR2O75899 941 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 FBXO21O94952 628 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 JUNDP17535 347 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 PSMC2P35998 433 aaKnown RBP15.33■□□□□ 0.04
HDAC6-224ENST00000481929 YWHAEP62258 255 aaKnown RBP15.33■□□□□ 0.04
HDAC6-224ENST00000481929 CUL4AQ13619 759 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 TMEM259Q4ZIN3 620 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 TTC39BQ5VTQ0 682 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-224ENST00000481929 PMF1Q6P1K2 205 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 RAB11FIP2Q7L804 512 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 SLC35F3Q8IY50 421 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 CEP57L1Q8IYX8 460 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 BTN2A3PQ96KV6 586 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 BMFQ96LC9 184 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 CCDC114Q96M63 670 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 BOCQ9BWV1 1114 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 SRRTQ9BXP5 876 aaKnown RBP15.33■□□□□ 0.04
HDAC6-224ENST00000481929 STRADBQ9C0K7 418 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 FAM13BQ9NYF5 915 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 MAN2B2Q9Y2E5 1009 aa15.33■□□□□ 0.04
HDAC6-224ENST00000481929 SPTBN1Q01082 2364 aaKnown RBP15.33■□□□□ 0.04
HDAC6-224ENST00000481929 CREBBPQ92793 2442 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 POM121BA6NF01 834 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 TMX2-CTNND1H3BSU7 103 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 NEFLP07196 543 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 CTSLP07711 333 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 RABIFP47224 123 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 MAPK8IP2Q13387 824 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-224ENST00000481929 CUL2Q13617 745 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 NFIL3Q16649 462 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 C8orf34Q49A92 452 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 RABGAP1LQ5R372 815 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 CXorf57Q6NSI4 855 aaKnown RBP15.32■□□□□ 0.04
HDAC6-224ENST00000481929 LCLAT1Q6UWP7 414 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 TAC4Q86UU9 113 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 SH2D3CQ8N5H7 860 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 SLC35F5Q8WV83 523 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 BTN2A2Q8WVV5 523 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 FAM149B1Q96BN6 582 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 ZNF396Q96N95 335 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-224ENST00000481929 MIS12Q9H081 205 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 EPN3Q9H201 632 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 SPASTQ9UBP0 616 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 KLF15Q9UIH9 416 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 KIAA1257Q9ULG3 409 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 MTMR6Q9Y217 621 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 PAXBP1Q9Y5B6 917 aa15.32■□□□□ 0.04
HDAC6-224ENST00000481929 TRPM6Q9BX84 2022 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 CLEC18AA5D8T8 446 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 NTN3O00634 580 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-224ENST00000481929 CASC3O15234 703 aaKnown RBP15.31■□□□□ 0.04
HDAC6-224ENST00000481929 STX10O60499 249 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 YEATS4O95619 227 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 FYNP06241 537 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 JMJD7P0C870 316 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 RPL13P26373 211 aaKnown RBP15.31■□□□□ 0.04
HDAC6-224ENST00000481929 CHRNA3P32297 505 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 FOXK1P85037 733 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 PDE1CQ14123 709 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-224ENST00000481929 ZC3H12AQ5D1E8 599 aaKnown RBP15.31■□□□□ 0.04
HDAC6-224ENST00000481929 CLEC18BQ6UXF7 455 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 ERN2Q76MJ5 926 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms