RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 RAD54BQ9Y620 910 aa10.53□□□□□ -0.72
PRPF4B-206ENST00000481109 MARF1Q9Y4F3 1742 aaKnown RBP10.53□□□□□ -0.72
PRPF4B-206ENST00000481109 KIF13BQ9NQT8 1826 aa10.52□□□□□ -0.72
PRPF4B-206ENST00000481109 NKRFO15226 690 aaKnown RBP eCLIP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 ZNF780AO75290 641 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 PSKH1P11801 424 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 MMP8P22894 467 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 MYF6P23409 242 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 UQCRC1P31930 480 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 SSTR3P32745 418 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 GNPDA1P46926 289 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 SCNN1GP51170 649 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 FAAP100Q0VG06 881 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 DBPQ10586 325 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 SLC12A1Q13621 1099 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 PTK6Q13882 451 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 GALEQ14376 348 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 HSF5Q4G112 596 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 FSCBQ5H9T9 825 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 FAM47AQ5JRC9 791 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 SLC9A4Q6AI14 798 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 TTC33Q6PID6 262 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 SLC9A9Q8IVB4 645 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 GLYCTKQ8IVS8 523 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 SYTL1Q8IYJ3 562 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 HIPK4Q8NE63 616 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 GANCQ8TET4 914 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 SNAPC3Q92966 411 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 IL12RB2Q99665 862 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 CINPQ9BW66 212 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 MTRRQ9UBK8 725 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 VPS28Q9UK41 221 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 HDAC9Q9UKV0 1011 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 DENND2AQ9ULE3 1009 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 MRPS7Q9Y2R9 242 aaKnown RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 MAP3K2Q9Y2U5 619 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 TCAF1Q9Y4C2 921 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 AKAP10O43572 662 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 UPK1BO75841 260 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 HOXD4P09016 255 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 IVDP26440 423 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 ELOAQ14241 798 aaKnown RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 LTB4RQ15722 352 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 ZYXQ15942 572 aaKnown RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 GTDC1Q4AE62 458 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 TTC39BQ5VTQ0 682 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 RETSATQ6NUM9 610 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 ZNF530Q6P9A1 599 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 RHOUQ7L0Q8 258 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 ZNF571Q7Z3V5 609 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 IRF2BP2Q7Z5L9 587 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 CCDC116Q8IYX3 515 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 UBL4BQ8N7F7 174 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 IL17RDQ8NFM7 739 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 TFAP2CQ92754 450 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 PKP2Q99959 881 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 TRIM8Q9BZR9 551 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 TMEM245Q9H330 911 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 COPS7BQ9H9Q2 264 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 IFT46Q9NQC8 304 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 POLR3BQ9NW08 1133 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 PSMC3IPQ9P2W1 217 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 CYB5R1Q9UHQ9 305 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 ACOT9Q9Y305 439 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 SLIT1O75093 1534 aa10.52□□□□□ -0.73
PRPF4B-206ENST00000481109 UTYO14607 1347 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 A0A1B0GWJ7 208 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 SDR42E2A6NKP2 422 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 PDZK1P1A8MUH7 402 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 PDHXO00330 501 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 CLN5O75503 358 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 SCO1O75880 301 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 PROCP04070 461 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 STMN1P16949 149 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 RAB3AP20336 220 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 EPHA3P29320 983 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 HTR3AP46098 478 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 SOX9P48436 509 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 MAPK12P53778 367 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 HADHBP55084 474 aaKnown RBP10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 RIPPLY1Q0D2K3 151 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 LRRC74AQ0VAA2 488 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 INCA1Q0VD86 236 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 MORF4L2Q15014 288 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 PTPROQ16827 1216 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 NHSL2Q5HYW2 709 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 BBS12Q6ZW61 710 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 CEP68Q76N32 757 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 ADAT2Q7Z6V5 191 aaKnown RBP10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 TLK2Q86UE8 772 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 JAZF1Q86VZ6 243 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 ZSWIM9Q86XI8 627 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 LYSMD2Q8IV50 215 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 NUDCD3Q8IVD9 361 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 FAM47BQ8NA70 645 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 SNX19Q92543 992 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 PTP4A1Q93096 173 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 CMTM5Q96DZ9 223 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 ST6GAL2Q96JF0 529 aa10.51□□□□□ -0.73
PRPF4B-206ENST00000481109 MAGED4Q96JG8 741 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms