RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 LRRN4Q8WUT4 740 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 HMCESQ96FZ2 354 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 RPL10LQ96L21 214 aaKnown RBP12.52□□□□□ -0.41
TRA2B-212ENST00000480461 ZNF670Q9BS34 389 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 SPON2Q9BUD6 331 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 CIPCQ9C0C6 399 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 CHRDQ9H2X0 955 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 MTG2Q9H4K7 406 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 CATSPERBQ9H7T0 1116 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 CD248Q9HCU0 757 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 DDX56Q9NY93 547 aaKnown RBP12.52□□□□□ -0.41
TRA2B-212ENST00000480461 RCOR3Q9P2K3 495 aaPredicted RBP12.52□□□□□ -0.41
TRA2B-212ENST00000480461 THAP10Q9P2Z0 257 aaPredicted RBP12.52□□□□□ -0.41
TRA2B-212ENST00000480461 ZFYVE26Q68DK2 2539 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 KIAA1549LQ6ZVL6 1849 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 DOCK4Q8N1I0 1966 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 CCDC66A2RUB6 948 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 RASA4BC9J798 803 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 J3KR12 359 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 SGK1O00141 431 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 FANCGO15287 622 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 RASA4O43374 803 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 DLDP09622 509 aaKnown RBP12.51□□□□□ -0.41
TRA2B-212ENST00000480461 POLR2EP19388 210 aaKnown RBP12.51□□□□□ -0.41
TRA2B-212ENST00000480461 WASP42768 502 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 STK19P49842 368 aaPredicted RBP12.51□□□□□ -0.41
TRA2B-212ENST00000480461 PAPOLAP51003 745 aaKnown RBP12.51□□□□□ -0.41
TRA2B-212ENST00000480461 NDST2P52849 883 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 ARF5P84085 180 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 SHC2P98077 582 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 ECT2LQ008S8 904 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 GBE1Q04446 702 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 SERINC3Q13530 473 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 ENPP2Q13822 863 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 DMC1Q14565 340 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 ZNF234Q14588 700 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 POLD3Q15054 466 aaPredicted RBP12.51□□□□□ -0.41
TRA2B-212ENST00000480461 PAFAH1B3Q15102 231 aaKnown RBP12.51□□□□□ -0.41
TRA2B-212ENST00000480461 CSRP2Q16527 193 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 FAM182AQ5T1J6 154 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 ZFYVE27Q5T4F4 411 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 SLC9A4Q6AI14 798 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 NPNTQ6UXI9 565 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 LINGO4Q6UY18 593 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 ZNF783Q6ZMS7 281 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 LEKR1Q6ZMV7 388 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 MAP7D3Q8IWC1 876 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 PLD5Q8N7P1 536 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 RPLP0P6Q8NHW5 317 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 WFIKKN2Q8TEU8 576 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 HEMGNQ9BXL5 484 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 MUC3BQ9H195 1237 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 MAGEH1Q9H213 219 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 TMEM245Q9H330 911 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 CACNA2D2Q9NY47 1150 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 SAE1Q9UBE0 346 aaPredicted RBP12.51□□□□□ -0.41
TRA2B-212ENST00000480461 VPS51Q9UID3 782 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 VPS28Q9UK41 221 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 ERVW-1Q9UQF0 538 aa12.51□□□□□ -0.41
TRA2B-212ENST00000480461 CNOT1A5YKK6 2376 aaKnown RBP12.51□□□□□ -0.41
TRA2B-212ENST00000480461 hCG_1818297A0A087WSY0 165 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 TCRBV7S2A1N4TA0A589 114 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 TTC34A8MYJ7 566 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 ZNF487B1APH4 448 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 CHURC1-FNTBB4DL54 471 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 SMAD6O43541 496 aaKnown RBP12.5□□□□□ -0.41
TRA2B-212ENST00000480461 KDELR3O43731 214 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 RAMP2O60895 175 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 ZNF821O75541 412 aaPredicted RBP12.5□□□□□ -0.41
TRA2B-212ENST00000480461 MAP3K6O95382 1288 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 KLF8O95600 359 aaPredicted RBP12.5□□□□□ -0.41
TRA2B-212ENST00000480461 HLA-EP13747 358 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 HOXB3P14651 431 aaPredicted RBP12.5□□□□□ -0.41
TRA2B-212ENST00000480461 VAV1P15498 845 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 PRKCHP24723 683 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 IL12RB1P42701 662 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 DNA2P51530 1060 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 OXCT1P55809 520 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 RWDD2BP57060 319 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 YBEYP58557 167 aaPredicted RBP12.5□□□□□ -0.41
TRA2B-212ENST00000480461 MRPS21P82921 87 aaKnown RBP12.5□□□□□ -0.41
TRA2B-212ENST00000480461 FBXO43Q4G163 708 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 PREPLQ4J6C6 727 aaPredicted RBP12.5□□□□□ -0.41
TRA2B-212ENST00000480461 ZNF569Q5MCW4 686 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 N4BP2L1Q5TBK1 243 aaPredicted RBP12.5□□□□□ -0.41
TRA2B-212ENST00000480461 TMEM92Q6UXU6 159 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 B4GALNT4Q76KP1 1039 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 VSIG1Q86XK7 387 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 CCDC117Q8IWD4 279 aaPredicted RBP12.5□□□□□ -0.41
TRA2B-212ENST00000480461 SLC35F6Q8N357 371 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 SYNPOQ8N3V7 929 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 ZNF366Q8N895 744 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 ZNF513Q8N8E2 541 aaPredicted RBP12.5□□□□□ -0.41
TRA2B-212ENST00000480461 ZNF557Q8N988 423 aaPredicted RBP12.5□□□□□ -0.41
TRA2B-212ENST00000480461 TXNDC5Q8NBS9 432 aaKnown RBP12.5□□□□□ -0.41
TRA2B-212ENST00000480461 TRIM58Q8NG06 486 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 KCNV2Q8TDN2 545 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 VOPP1Q96AW1 172 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 ERLEC1Q96DZ1 483 aa12.5□□□□□ -0.41
TRA2B-212ENST00000480461 STON1Q9Y6Q2 735 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms