RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 BTBD19C9JJ37 291 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 USP12O75317 370 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 RPL10P27635 214 aaKnown RBP13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 SH2D4BQ5SQS7 431 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 NCBP2-AS2Q69YL0 99 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 FASTKD5Q7L8L6 764 aaKnown RBP13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 NUP93Q8N1F7 819 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 TMEM102Q8N9M5 508 aaPredicted RBP13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 GPRC5AQ8NFJ5 357 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 HTR3CQ8WXA8 447 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 CATSPER2Q96P56 530 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 GATA5Q9BWX5 397 aaPredicted RBP13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 SLC2A11Q9BYW1 496 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 ZNF408Q9H9D4 720 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 ZNF510Q9Y2H8 683 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 PRSS51A0A1B0GVH4 220 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 RGSL1A5PLK6 1076 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 MDM4O15151 490 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 GPR32O75388 356 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 THRAP10827 490 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 IMPDH2P12268 514 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 INSCQ1MX18 579 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 EML3Q32P44 896 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 USP41Q3LFD5 358 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 FSTL4Q6MZW2 842 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 GCOM2Q9BZD3 368 aaPredicted RBP13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 PLK2Q9NYY3 685 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 TXNDC16Q9P2K2 825 aa13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 PRPF19Q9UMS4 504 aaKnown RBP13.55□□□□□ -0.24
PDZRN3-208ENST00000479530 CSPG5O95196 566 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 STAU1O95793 577 aaKnown RBP13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 MMP3P08254 477 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 PGAM1P18669 254 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 FGFR3P22607 806 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 PSMB4P28070 264 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 COG7P83436 770 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 CYLC2Q14093 348 aaPredicted RBP13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 DPYSL2Q16555 572 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 IL23RQ5VWK5 629 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 LRRC8BQ6P9F7 803 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 ADCY4Q8NFM4 1077 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 ATP6V1E2Q96A05 226 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 NPAS2Q99743 824 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 GMEB1Q9Y692 573 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 A0A0A0MRY4 1105 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 TK2O00142 265 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 MATN2O00339 956 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 XPO1O14980 1071 aaKnown RBP13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 CCDC166P0CW27 439 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 ARSAP15289 507 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 ZNF26P17031 533 aaPredicted RBP13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 GNL1P36915 607 aaPredicted RBP13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 GP5P40197 560 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 KLHL35Q6PF15 583 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 C16orf89Q6UX73 402 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 STRA8Q7Z7C7 330 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 OSTM1Q86WC4 334 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 DEFB106AQ8N104 65 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 RNF169Q8NCN4 708 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 ARRDC4Q8NCT1 418 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 CENPIQ92674 756 aaPredicted RBP13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 TMA16Q96EY4 203 aaKnown RBP13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 CERS2Q96G23 380 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 SPATA13Q96N96 652 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 PLEKHG4BQ96PX9 1271 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 SERPINI1Q99574 410 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 SUDS3Q9H7L9 328 aaPredicted RBP13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 WDR41Q9HAD4 459 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 SEPT10Q9P0V9 454 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 MORF4L1Q9UBU8 362 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 TDRKHQ9Y2W6 561 aaKnown RBP13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 PCDHGA4Q9Y5G9 962 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 A0A096LPK6 155 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 GOLGA8TH3BQL2 631 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 PDHXO00330 501 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 ACOT8O14734 319 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 MFSD11O43934 449 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 SETSIPP0DME0 302 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 STT3AP46977 705 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 NR1H2P55055 460 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 PPIDQ08752 370 aaKnown RBP13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 DCTN2Q13561 401 aaKnown RBP13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 HSP90AA5PQ58FG0 334 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 OTUD1Q5VV17 481 aaPredicted RBP13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 ALKAL1Q6UXT8 129 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 HFE2Q6ZVN8 426 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 PDCD6IPQ8WUM4 868 aaKnown RBP13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 FAM149B1Q96BN6 582 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 AGAP3Q96P47 875 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 TIMMDC1Q9NPL8 285 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 USP3Q9Y6I4 520 aa13.54□□□□□ -0.24
PDZRN3-208ENST00000479530 SMIM28A0A1B0GU29 152 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 ARHGAP10A1A4S6 786 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 RNF103O00237 685 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 DYNC1LI2O43237 492 aaPredicted RBP13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 MGAT5BQ3V5L5 792 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 CCDC153Q494R4 210 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 SYPL2Q5VXT5 272 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 METTL21CQ5VZV1 264 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 SLC27A1Q6PCB7 646 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms