RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 SOX5P35711 763 aa17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 TAS2R38P59533 333 aa17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 CDR2Q01850 454 aa17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 DNAJC3Q13217 504 aa17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 HNRNPDQ14103 355 aaKnown RBP17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 FAM72AQ5TYM5 149 aa17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 FAM72DQ6L9T8 149 aa17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 LRRC31Q6UY01 552 aa17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 DBX2Q6ZNG2 339 aa17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 FAM72BQ86X60 149 aa17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 MDM1Q8TC05 714 aa17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 PGAP3Q96FM1 320 aaPredicted RBP17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 SEPT11Q9NVA2 429 aaKnown RBP17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 RRN3Q9NYV6 651 aa17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 PPM1HQ9ULR3 514 aa17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 A0A1B0GTQ1 180 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 DRGXA6NNA5 263 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 C10orf142B7Z368 130 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 C1QTNF3-AMACRE9PGA6 284 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 MCF2LO15068 1137 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 SDC3O75056 442 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 LSM8O95777 96 aaKnown RBP17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 CYP1A1P04798 512 aaPredicted RBP17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 CHRNA3P32297 505 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 ACVRL1P37023 503 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 DNA2P51530 1060 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 CCR5P51681 352 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 OXCT1P55809 520 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 SFSWAPQ12872 951 aaKnown RBP17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 CCDC14Q49A88 953 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 C22orf39Q6P5X5 142 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 DHRS13Q6UX07 377 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 SPATS2Q86XZ4 545 aaKnown RBP17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 CCDC185Q8N715 623 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 OR2A12Q8NGT7 310 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 ELF4Q99607 663 aaPredicted RBP17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 FCF1Q9Y324 198 aaKnown RBP17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 PCDHGB2Q9Y5G2 931 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 CELSR3Q9NYQ7 3312 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 SLC31A1O15431 190 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 RNGTTO60942 597 aaKnown RBP17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 F9P00740 461 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 GKP32189 559 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 KRT83P78385 493 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 SUZ12Q15022 739 aaKnown RBP17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 ARSIQ5FYB1 569 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 FKBP15Q5T1M5 1219 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 PIP5KL1Q5T9C9 394 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 RWDD4Q6NW29 188 aaKnown RBP17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 CLEC17AQ6ZS10 378 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 RBM43Q6ZSC3 357 aaKnown RBP17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 BNIPLQ7Z465 357 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 DSG4Q86SJ6 1040 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 GLRX5Q86SX6 157 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 DNAAF5Q86Y56 855 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 EID2Q8N6I1 236 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 MSANTD4Q8NCY6 345 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 OR6K2Q8NGY2 324 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 C2orf49Q9BVC5 232 aaPredicted RBP17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 TM6SF2Q9BZW4 377 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 ATP13A1Q9HD20 1204 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 ZNF212Q9UDV6 495 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 DNAI1Q9UI46 699 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 HS3ST2Q9Y278 367 aa17.79■□□□□ 0.44
ECHDC1-216ENST00000479525 LAMA5O15230 3695 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 COL5A1P20908 1838 aaPredicted RBP17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 IGLV3-10A0A075B6K4 115 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 ITGAVP06756 1048 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 ATP1A3P13637 1013 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 MMP8P22894 467 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 SCNN1AP37088 669 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 GRK6P43250 576 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 NXPH1P58417 271 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 ARF5P84085 180 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 UBXN1Q04323 297 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 PTP4A2Q12974 167 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 FAM46CQ5VWP2 391 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 NAPEPLDQ6IQ20 393 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 SASS6Q6UVJ0 657 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 KDM7AQ6ZMT4 941 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 DPY19L3Q6ZPD9 716 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 PRPF39Q86UA1 669 aaKnown RBP17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 PYROXD2Q8N2H3 581 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 AOPEPQ8N6M6 819 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 DCAF4L2Q8NA75 395 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 ZYG11BQ9C0D3 744 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 GDF3Q9NR23 364 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 FTSJ1Q9UET6 329 aa17.78■□□□□ 0.44
ECHDC1-216ENST00000479525 ARID1BQ8NFD5 2236 aaPredicted RBP17.77■□□□□ 0.44
ECHDC1-216ENST00000479525 ADAMTS20P59510 1910 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 A0A1W2PQU0 124 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 TLR4O00206 839 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 LATO43561 262 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 ZNF821O75541 412 aaPredicted RBP17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 LEFTY1O75610 366 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 TPM2P07951 284 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 STAT1P42224 750 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 CLDN2P57739 230 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 C6orf118Q5T5N4 469 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 SEL1L3Q68CR1 1132 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms