RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 CCDC117Q8IWD4 279 aaPredicted RBP25.06■■□□□ 1.6
SYNGAP1-206ENST00000479510 PPP1R2P1Q96PQ5 205 aa25.06■■□□□ 1.6
SYNGAP1-206ENST00000479510 CHRAC1Q9NRG0 131 aa25.06■■□□□ 1.6
SYNGAP1-206ENST00000479510 IARS2Q9NSE4 1012 aaKnown RBP25.06■■□□□ 1.6
SYNGAP1-206ENST00000479510 VPS28Q9UK41 221 aa25.06■■□□□ 1.6
SYNGAP1-206ENST00000479510 RGSL1A5PLK6 1076 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 HERC3Q15034 1050 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 ZC3HC1Q86WB0 502 aaKnown RBP25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 ZFAND2BQ8WV99 257 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 MS4A4AQ96JQ5 239 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 SENP8Q96LD8 212 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 GBP5Q96PP8 586 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 C1QTNF1Q9BXJ1 281 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 CAB39LQ9H9S4 337 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 AAR2Q9Y312 384 aaKnown RBP25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 E9PBE3 544 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 KLHL41O60662 606 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 PDE5AO76074 875 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 YBX3P16989 372 aaKnown RBP eCLIP25.05■■□□□ 1.61e-7■■■■□ 23.4
SYNGAP1-206ENST00000479510 CYP2C18P33260 490 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 PSEN2P49810 448 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 DLG2Q15700 870 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 RNF220Q5VTB9 566 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 SEL1L3Q68CR1 1132 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 NAIF1Q69YI7 327 aaPredicted RBP25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 CNTN4Q8IWV2 1026 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 RP9Q8TA86 221 aaKnown RBP25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 ZSCAN18Q8TBC5 510 aaPredicted RBP25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 OXCT2Q9BYC2 517 aaPredicted RBP25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 WDCPQ9H6R7 721 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 CYP4F11Q9HBI6 524 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 STK39Q9UEW8 545 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 OR12D3Q9UGF7 316 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 BCAP29Q9UHQ4 241 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 CDH9Q9ULB4 789 aa25.05■■□□□ 1.6
SYNGAP1-206ENST00000479510 ZNF638Q14966 1978 aaKnown RBP25.04■■□□□ 1.6
SYNGAP1-206ENST00000479510 LOC100653049A0A140TA62 436 aa25.04■■□□□ 1.6
SYNGAP1-206ENST00000479510 KRT34O76011 436 aa25.04■■□□□ 1.6
SYNGAP1-206ENST00000479510 UPP2O95045 317 aa25.04■■□□□ 1.6
SYNGAP1-206ENST00000479510 GMPRP36959 345 aa25.04■■□□□ 1.6
SYNGAP1-206ENST00000479510 SLC12A1Q13621 1099 aa25.04■■□□□ 1.6
SYNGAP1-206ENST00000479510 SMAD1Q15797 465 aaKnown RBP25.04■■□□□ 1.6
SYNGAP1-206ENST00000479510 SCML4Q8N228 414 aa25.04■■□□□ 1.6
SYNGAP1-206ENST00000479510 PIP4K2CQ8TBX8 421 aa25.04■■□□□ 1.6
SYNGAP1-206ENST00000479510 ADAM32Q8TC27 787 aa25.04■■□□□ 1.6
SYNGAP1-206ENST00000479510 MAPK15Q8TD08 544 aa25.04■■□□□ 1.6
SYNGAP1-206ENST00000479510 BTBD9Q96Q07 612 aa25.04■■□□□ 1.6
SYNGAP1-206ENST00000479510 TSPYL2Q9H2G4 693 aaPredicted RBP25.04■■□□□ 1.6
SYNGAP1-206ENST00000479510 SLC39A10Q9ULF5 831 aa25.04■■□□□ 1.6
SYNGAP1-206ENST00000479510 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 E2F8A0AVK6 867 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 DDHD2O94830 711 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 UBTFL6P0CB48 400 aaPredicted RBP25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 GRM3Q14832 879 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 ARMC3Q5W041 872 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 RNF111Q6ZNA4 994 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 SDCCAG8Q86SQ7 713 aaPredicted RBP25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 TMEM126BQ8IUX1 230 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 TMEM151AQ8N4L1 468 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 ZMIZ2Q8NF64 920 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 SHKBP1Q8TBC3 707 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 STYXQ8WUJ0 223 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 PDCD6IPQ8WUM4 868 aaKnown RBP25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 PTCD2Q8WV60 388 aaKnown RBP25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 LENG8Q96PV6 779 aaPredicted RBP25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 TRIM62Q9BVG3 475 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 OSBPL2Q9H1P3 480 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 TASP1Q9H6P5 420 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 PAPOLBQ9NRJ5 636 aaKnown RBP25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 C6orf203Q9P0P8 240 aaPredicted RBP25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 UQCRBP14927 111 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 PIK3R1P27986 724 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 NMBRP28336 390 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 PCID2Q5JVF3 399 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 TWF2Q6IBS0 349 aaKnown RBP25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 HPS6Q86YV9 775 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 GDPD5Q8WTR4 605 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 SMARCD1Q96GM5 515 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 PCED1BQ96HM7 432 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 OR52B2Q96RD2 323 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 ADAMTS6Q9UKP5 1117 aa25.03■■□□□ 1.6
SYNGAP1-206ENST00000479510 COL4A4P53420 1690 aaPredicted RBP25.02■■□□□ 1.6
SYNGAP1-206ENST00000479510 CCL15-CCL14A0A0B4J2E2 113 aa25.02■■□□□ 1.6
SYNGAP1-206ENST00000479510 ENO4A6NNW6 628 aa25.02■■□□□ 1.6
SYNGAP1-206ENST00000479510 HHLA1C9JL84 531 aa25.02■■□□□ 1.6
SYNGAP1-206ENST00000479510 JCHAINP01591 159 aa25.02■■□□□ 1.6
SYNGAP1-206ENST00000479510 USP17L7P0C7H9 530 aa25.02■■□□□ 1.6
SYNGAP1-206ENST00000479510 HTR7P34969 479 aa25.02■■□□□ 1.6
SYNGAP1-206ENST00000479510 PAPOLAP51003 745 aaKnown RBP25.02■■□□□ 1.6
SYNGAP1-206ENST00000479510 CCL15Q16663 113 aa25.02■■□□□ 1.6
SYNGAP1-206ENST00000479510 PKN3Q6P5Z2 889 aa25.02■■□□□ 1.6
SYNGAP1-206ENST00000479510 GALNT15Q8N3T1 639 aa25.02■■□□□ 1.6
SYNGAP1-206ENST00000479510 KYQ8NBH2 561 aa25.02■■□□□ 1.6
SYNGAP1-206ENST00000479510 CCDC124Q96CT7 223 aaKnown RBP25.02■■□□□ 1.6
SYNGAP1-206ENST00000479510 PGLYRP2Q96PD5 576 aa25.02■■□□□ 1.6
SYNGAP1-206ENST00000479510 EBF3Q9H4W6 596 aa25.02■■□□□ 1.6
SYNGAP1-206ENST00000479510 TREHO43280 583 aa25.01■■□□□ 1.59
SYNGAP1-206ENST00000479510 LRIG2O94898 1065 aa25.01■■□□□ 1.59
SYNGAP1-206ENST00000479510 CCNCP24863 283 aa25.01■■□□□ 1.59
SYNGAP1-206ENST00000479510 EPHX2P34913 555 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms