RNA–Protein interactions for RNA: ENST00000479384.1

CLOCK-204, Transcript of clock circadian regulator, humanhuman

TSL 2

Gene CLOCK, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-204ENST00000479384 FAM47BQ8NA70 645 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 GLMPQ8WWB7 406 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 NPIPB3Q92617 1050 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 SDCCAG3Q96C92 435 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 CLMNQ96JQ2 1002 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 UBXN10Q96LJ8 280 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 GPR78Q96P69 363 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 PYM1Q9BRP8 204 aaKnown RBP3.66□□□□□ -1.82
CLOCK-204ENST00000479384 DCLK3Q9C098 648 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 ISCUQ9H1K1 167 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 CHODLQ9H9P2 273 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 PLAC1Q9HBJ0 212 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 KCNK9Q9NPC2 374 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 SAGE1Q9NXZ1 904 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 KCND3Q9UK17 655 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 FEM1BQ9UK73 627 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 BAG5Q9UL15 447 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 RAB21Q9UL25 225 aa3.66□□□□□ -1.82
CLOCK-204ENST00000479384 INAFM1C9JVW0 142 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 NTN3O00634 580 aaPredicted RBP3.65□□□□□ -1.83
CLOCK-204ENST00000479384 NKX2-8O15522 239 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 TK1P04183 234 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 RFPL3SP0C7P2 107 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 PEPDP12955 493 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 CPA1P15085 419 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 GRK5P34947 590 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 COMPP49747 757 aaPredicted RBP3.65□□□□□ -1.83
CLOCK-204ENST00000479384 ACTR2P61160 394 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 CRYZQ08257 329 aaKnown RBP3.65□□□□□ -1.83
CLOCK-204ENST00000479384 PDCLQ13371 301 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 IZUMO4Q1ZYL8 232 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 ALFQ53S48 1182 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 PRAMEF19Q5SWL8 479 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 HMBOX1Q6NT76 420 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 WDR93Q6P2C0 686 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 C16orf89Q6UX73 402 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 SYNE3Q6ZMZ3 975 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 TMEM57Q8N5G2 664 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 PAF1Q8N7H5 531 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 OR52N4Q8NGI2 321 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 WBP1Q96G27 269 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 COG8Q96MW5 612 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 TM6SF1Q9BZW5 370 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 TWSG1Q9GZX9 223 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 ZNF556Q9HAH1 456 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 RIC8AQ9NPQ8 531 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 C9orf78Q9NZ63 289 aaPredicted RBP3.65□□□□□ -1.83
CLOCK-204ENST00000479384 NCKIPSDQ9NZQ3 722 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 TRPC5Q9UL62 973 aaPredicted RBP3.65□□□□□ -1.83
CLOCK-204ENST00000479384 SLC12A4Q9UP95 1085 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 PCDHGB1Q9Y5G3 927 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 LRRFIP2Q9Y608 721 aaKnown RBP3.65□□□□□ -1.83
CLOCK-204ENST00000479384 KIF26BQ2KJY2 2108 aa3.65□□□□□ -1.83
CLOCK-204ENST00000479384 NOTCH3Q9UM47 2321 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 A0A1B0GUV1 79 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 RRN3P2A6NIE6 340 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 AGAP5A6NIR3 686 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 MBD3L5A6NJ08 208 aaPredicted RBP3.64□□□□□ -1.83
CLOCK-204ENST00000479384 NCAM2O15394 837 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 TFRCP02786 760 aaKnown RBP3.64□□□□□ -1.83
CLOCK-204ENST00000479384 PYGLP06737 847 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 CKMT1AP12532 417 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 PKMP14618 531 aaKnown RBP3.64□□□□□ -1.83
CLOCK-204ENST00000479384 PCYT1AP49585 367 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 MCM2P49736 904 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 ART1P52961 327 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 FAM3BP58499 235 aaPredicted RBP3.64□□□□□ -1.83
CLOCK-204ENST00000479384 HILS1P60008 231 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 RPL15P61313 204 aaKnown RBP3.64□□□□□ -1.83
CLOCK-204ENST00000479384 TLE3Q04726 772 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 Q0VFX4 171 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 EFR3AQ14156 821 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 SHBQ15464 509 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 SMAD1Q15797 465 aaKnown RBP3.64□□□□□ -1.83
CLOCK-204ENST00000479384 Q5PR19 223 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 DGAT2L7PQ6IED9 249 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 PRSS57Q6UWY2 283 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 HERC6Q8IVU3 1022 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 FSIP1Q8NA03 581 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 CEP70Q8NHQ1 597 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 USP13Q92995 863 aaPredicted RBP3.64□□□□□ -1.83
CLOCK-204ENST00000479384 EVI5LQ96CN4 794 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 ZNF347Q96SE7 839 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 NAP1L4Q99733 375 aaKnown RBP3.64□□□□□ -1.83
CLOCK-204ENST00000479384 KRCC1Q9NPI7 259 aaPredicted RBP3.64□□□□□ -1.83
CLOCK-204ENST00000479384 G6PC2Q9NQR9 355 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 TMLHEQ9NVH6 421 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 B3GNT3Q9Y2A9 372 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 DERAQ9Y315 318 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 RRP7AQ9Y3A4 280 aaKnown RBP3.64□□□□□ -1.83
CLOCK-204ENST00000479384 PCDHA10Q9Y5I2 948 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 PTGDR2Q9Y5Y4 395 aa3.64□□□□□ -1.83
CLOCK-204ENST00000479384 GAGE12JA6NER3 117 aa3.63□□□□□ -1.83
CLOCK-204ENST00000479384 FAM90A20PA6NIJ5 464 aa3.63□□□□□ -1.83
CLOCK-204ENST00000479384 OR6C75A6NL08 312 aa3.63□□□□□ -1.83
CLOCK-204ENST00000479384 BECN2A8MW95 431 aa3.63□□□□□ -1.83
CLOCK-204ENST00000479384 FOXO6A8MYZ6 492 aa3.63□□□□□ -1.83
CLOCK-204ENST00000479384 SEPT4O43236 478 aa3.63□□□□□ -1.83
CLOCK-204ENST00000479384 RGS14O43566 566 aa3.63□□□□□ -1.83
CLOCK-204ENST00000479384 DDNO94850 711 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms