RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 PCDH20Q8N6Y1 951 aaKnown RBP8.12□□□□□ -1.11
DDX39B-218ENST00000478365 CCDC185Q8N715 623 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 ATP11CQ8NB49 1132 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 ZNF564Q8TBZ8 553 aaPredicted RBP8.12□□□□□ -1.11
DDX39B-218ENST00000478365 NETO1Q8TDF5 533 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 MYO19Q96H55 970 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 LRIG1Q96JA1 1093 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 TACO1Q9BSH4 297 aaKnown RBP8.12□□□□□ -1.11
DDX39B-218ENST00000478365 NUP85Q9BW27 656 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 NUSAP1Q9BXS6 441 aaKnown RBP8.12□□□□□ -1.11
DDX39B-218ENST00000478365 MKRN2Q9H000 416 aaKnown RBP8.12□□□□□ -1.11
DDX39B-218ENST00000478365 BTBD1Q9H0C5 482 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 PABPC3Q9H361 631 aaKnown RBP8.12□□□□□ -1.11
DDX39B-218ENST00000478365 ZWILCHQ9H900 591 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 ATP13A1Q9HD20 1204 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 ZDHHC4Q9NPG8 344 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 ANLNQ9NQW6 1124 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 SEMA4GQ9NTN9 838 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 HAUS2Q9NVX0 235 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 WSB2Q9NYS7 404 aaPredicted RBP8.12□□□□□ -1.11
DDX39B-218ENST00000478365 MPP6Q9NZW5 540 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 CTTNBP2NLQ9P2B4 639 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 MYO1AQ9UBC5 1043 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 ZNF212Q9UDV6 495 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 VPS51Q9UID3 782 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 ANAPC7Q9UJX3 599 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 CYP8B1Q9UNU6 501 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 RAD54BQ9Y620 910 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 NYNRINQ9P2P1 1898 aaKnown RBP8.12□□□□□ -1.11
DDX39B-218ENST00000478365 CFAP54Q96N23 3096 aa8.12□□□□□ -1.11
DDX39B-218ENST00000478365 MEI4A8MW99 385 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 TTC34A8MYJ7 566 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 I6L893 689 aaPredicted RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 CBX4O00257 560 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 EEF2KO00418 725 aaKnown RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 PPP1R12AO14974 1030 aaPredicted RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 KHNYNO15037 678 aaKnown RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 MCF2LO15068 1137 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 ATMINO43313 823 aaPredicted RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 NRDCO43847 1150 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 CREB3O43889 395 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 SIN3BO75182 1162 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 LRCH4O75427 683 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 CNTN5O94779 1100 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 GJB6O95452 261 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 KRT7P08729 469 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 HLA-EP13747 358 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 MIPP30301 263 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 SERPINB6P35237 376 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 GGCXP38435 758 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 ARHGAP25P42331 645 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 SERPINH1P50454 418 aaKnown RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 ZNF75DP51815 510 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 LIMK1P53667 647 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 GALCP54803 685 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 RPS14P62263 151 aaKnown RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 CREB5Q02930 508 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 RAD51Q06609 339 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 ZNF33AQ06730 810 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 SEMA3BQ13214 749 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 GRM3Q14832 879 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 SPA17Q15506 151 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 DPYSL2Q16555 572 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 LPAL2Q16609 132 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 DUOXA1Q1HG43 343 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 ASTE1Q2TB18 679 aaPredicted RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 ACCSLQ4AC99 568 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 INO80DQ53TQ3 878 aaPredicted RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 PLA2G2CQ5R387 149 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 C9orf64Q5T6V5 341 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 SH3PXD2AQ5TCZ1 1133 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 PEAR1Q5VY43 1037 aaPredicted RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 IL31Q6EBC2 164 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 C22orf39Q6P5X5 142 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 VSIG1Q86XK7 387 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 LRRC49Q8IUZ0 686 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 KRT222Q8N1A0 295 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 UMODL1-AS1Q8N2C9 162 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 TMIEQ8NEW7 156 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 GANCQ8TET4 914 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 RLN3Q8WXF3 142 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 RFFLQ8WZ73 363 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 ARHGEF2Q92974 986 aaKnown RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 TOE1Q96GM8 510 aaKnown RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 ZNF419Q96HQ0 510 aaPredicted RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 PANX2Q96RD6 677 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 OMDQ99983 421 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 SPON2Q9BUD6 331 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 SNRNP25Q9BV90 132 aaKnown RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 ACE2Q9BYF1 805 aaPredicted RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 ZDHHC5Q9C0B5 715 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 THAP2Q9H0W7 228 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 DHX35Q9H5Z1 703 aaKnown RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 NHEJ1Q9H9Q4 299 aaPredicted RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 DYRK4Q9NR20 520 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 POLR3BQ9NW08 1133 aaPredicted RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 IMPACTQ9P2X3 320 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 RSPH14Q9UHP6 348 aa8.11□□□□□ -1.11
DDX39B-218ENST00000478365 CDV3Q9UKY7 258 aaKnown RBP8.11□□□□□ -1.11
DDX39B-218ENST00000478365 NENFQ9UMX5 172 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms