RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 CADM4Q8NFZ8 388 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 RMDN1Q96DB5 314 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 CCDC42Q96M95 316 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 NCAPGQ9BPX3 1015 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 BTBD1Q9H0C5 482 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 TNKS2Q9H2K2 1166 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 CATSPERBQ9H7T0 1116 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 SPTLC3Q9NUV7 552 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 SARDHQ9UL12 918 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 SCML1Q9UN30 329 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 NCKAP1Q9Y2A7 1128 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 METTL12A8MUP2 240 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 MEI4A8MW99 385 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 WASH4PA8MWX3 477 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 PRR5-ARHGAP8B1AHC4 643 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 EIF3CLB5ME19 914 aaKnown RBP15.92■□□□□ 0.14
HMGA1-206ENST00000478214 EEF2KO00418 725 aaKnown RBP15.92■□□□□ 0.14
HMGA1-206ENST00000478214 KHNYNO15037 678 aaKnown RBP15.92■□□□□ 0.14
HMGA1-206ENST00000478214 MCF2LO15068 1137 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 FGF10O15520 208 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-206ENST00000478214 ZNF821O75541 412 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-206ENST00000478214 SEMA4FO95754 770 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 CD160O95971 181 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 ADH1BP00325 375 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 H2AFZP0C0S5 128 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 MAOBP27338 520 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 HTR7P34969 479 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 SERPINH1P50454 418 aaKnown RBP15.92■□□□□ 0.14
HMGA1-206ENST00000478214 ARHGAP8P85298 464 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 SLC20A2Q08357 652 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 RSPO4Q2I0M5 234 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-206ENST00000478214 PPP6R3Q5H9R7 873 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-206ENST00000478214 KCNT1Q5JUK3 1230 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 DCAF12L1Q5VU92 463 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 PEAR1Q5VY43 1037 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-206ENST00000478214 C22orf39Q6P5X5 142 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 LEKR1Q6ZMV7 388 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 USP30Q70CQ3 517 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 H2AFVQ71UI9 128 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 PSTKQ8IV42 348 aaKnown RBP15.92■□□□□ 0.14
HMGA1-206ENST00000478214 HDDC3Q8N4P3 179 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 AADATQ8N5Z0 425 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 NIPA2Q8N8Q9 360 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 TC2NQ8N9U0 490 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 OR2A12Q8NGT7 310 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 ZNF564Q8TBZ8 553 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-206ENST00000478214 CTNNBL1Q8WYA6 563 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-206ENST00000478214 EIF3CQ99613 913 aaKnown RBP15.92■□□□□ 0.14
HMGA1-206ENST00000478214 OMDQ99983 421 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 NEUROG2Q9H2A3 272 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 C6orf106Q9H6K1 298 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-206ENST00000478214 SGK2Q9HBY8 427 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 CTTNBP2NLQ9P2B4 639 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 IP6K2Q9UHH9 426 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 PPM1HQ9ULR3 514 aa15.92■□□□□ 0.14
HMGA1-206ENST00000478214 NUMA1Q14980 2115 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 RALGAPA1Q6GYQ0 2036 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 RASA4BC9J798 803 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 MYO1FO00160 1098 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 ALOX15BO15296 676 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 RASA4O43374 803 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 GOT1P17174 413 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 C5AR1P21730 350 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 HOXD12P35452 270 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 DPP6P42658 865 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 ID4P47928 161 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 IRX4P78413 519 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 SFSWAPQ12872 951 aaKnown RBP15.91■□□□□ 0.14
HMGA1-206ENST00000478214 SMTNL2Q2TAL5 461 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 POM121L1PQ3SYA9 428 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 TRIM61Q5EBN2 209 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 WDR45BQ5MNZ6 344 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 SYCP2LQ5T4T6 812 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 TXNRD3NBQ6F5E7 133 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 RFX8Q6ZV50 586 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 DSG4Q86SJ6 1040 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 ZNF354CQ86Y25 554 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 CPNE8Q86YQ8 564 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 UMODL1-AS1Q8N2C9 162 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 CHST14Q8NCH0 376 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 DNASE2BQ8WZ79 361 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 HMCESQ96FZ2 354 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 MRFAP1L1Q96HT8 127 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 KLC2Q9H0B6 622 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 ZWILCHQ9H900 591 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 EVLQ9UI08 416 aaPredicted RBP15.91■□□□□ 0.14
HMGA1-206ENST00000478214 FCF1Q9Y324 198 aaKnown RBP15.91■□□□□ 0.14
HMGA1-206ENST00000478214 LAMA1P25391 3075 aa15.91■□□□□ 0.14
HMGA1-206ENST00000478214 LNP1A1A4G5 178 aa15.9■□□□□ 0.14
HMGA1-206ENST00000478214 FAM47DPA6NHR8 397 aa15.9■□□□□ 0.14
HMGA1-206ENST00000478214 PLK4O00444 970 aa15.9■□□□□ 0.14
HMGA1-206ENST00000478214 DAPK3O43293 454 aa15.9■□□□□ 0.14
HMGA1-206ENST00000478214 KDELR3O43731 214 aa15.9■□□□□ 0.14
HMGA1-206ENST00000478214 CFIP05156 583 aa15.9■□□□□ 0.14
HMGA1-206ENST00000478214 CTSLP07711 333 aa15.9■□□□□ 0.14
HMGA1-206ENST00000478214 TMEM253P0C7T8 217 aa15.9■□□□□ 0.14
HMGA1-206ENST00000478214 RARAP10276 462 aa15.9■□□□□ 0.14
HMGA1-206ENST00000478214 ERCC2P18074 760 aa15.9■□□□□ 0.14
HMGA1-206ENST00000478214 CHRNA3P32297 505 aa15.9■□□□□ 0.14
HMGA1-206ENST00000478214 DRD3P35462 400 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms