RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 RRM1P23921 792 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 ACP1P24666 158 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 PON1P27169 355 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 CHRNA3P32297 505 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 SULT1E1P49888 294 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 RNASE9P60153 205 aaKnown RBP12.04□□□□□ -0.48
CPSF7-211ENST00000477890 DAB2P98082 770 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 INSM1Q01101 510 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-211ENST00000477890 CCDC15Q0P6D6 951 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 PROX2Q3B8N5 592 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 HS1BP3Q53T59 392 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 OTUD1Q5VV17 481 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-211ENST00000477890 SLC47A2Q86VL8 602 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 TMEM145Q8NBT3 493 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 OR2A12Q8NGT7 310 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 BAP1Q92560 729 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 ARRDC3Q96B67 414 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 PSMB7Q99436 277 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 C2orf49Q9BVC5 232 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-211ENST00000477890 CALN1Q9BXU9 219 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 FZD3Q9NPG1 666 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 PLCB1Q9NQ66 1216 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 ANLNQ9NQW6 1124 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 DYRK4Q9NR20 520 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 PIGVQ9NUD9 493 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 VPS51Q9UID3 782 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 RWDD2AQ9UIY3 292 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 AJAP1Q9UKB5 411 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-211ENST00000477890 STAP1Q9ULZ2 295 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 SNX10Q9Y5X0 201 aa12.04□□□□□ -0.48
CPSF7-211ENST00000477890 A0A0D9SEW6 157 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 GTPBP10A4D1E9 387 aaKnown RBP12.03□□□□□ -0.48
CPSF7-211ENST00000477890 FFAR2O15552 330 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 SMAD6O43541 496 aaKnown RBP12.03□□□□□ -0.48
CPSF7-211ENST00000477890 PCDH8O95206 1070 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 PRNPP04156 253 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 PNMA6AP0CW24 399 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-211ENST00000477890 TFE3P19532 575 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-211ENST00000477890 DGKAP23743 735 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 MTIF2P46199 727 aaKnown RBP12.03□□□□□ -0.48
CPSF7-211ENST00000477890 CXCR3P49682 368 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 KCNMA1Q12791 1236 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 ZNF211Q13398 564 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-211ENST00000477890 BRMS1LQ5PSV4 323 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 NEK5Q6P3R8 708 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 LINGO4Q6UY18 593 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 HORMAD1Q86X24 394 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 SLC25A45Q8N413 288 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 CHST14Q8NCH0 376 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 TMIEQ8NEW7 156 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 ZNF397Q8NF99 534 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-211ENST00000477890 GRIN3AQ8TCU5 1115 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 RFFLQ8WZ73 363 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 UBL7Q96S82 380 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-211ENST00000477890 NPY6RQ99463 290 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 SIX2Q9NPC8 291 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 KLHL11Q9NVR0 708 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 UCKL1Q9NWZ5 548 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 ARHGEF38Q9NXL2 777 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 RRN3Q9NYV6 651 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.03□□□□□ -0.485e-9■■□□□ 12.4
CPSF7-211ENST00000477890 DNAJC12Q9UKB3 198 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 DOCK4Q8N1I0 1966 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 TRPM6Q9BX84 2022 aa12.03□□□□□ -0.48
CPSF7-211ENST00000477890 FAM170AA1A519 330 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 I6L893 689 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-211ENST00000477890 RNF103O00237 685 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 FOXN3O00409 490 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-211ENST00000477890 BRINP1O60477 761 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 HNRNPA2B1P22626 353 aaKnown RBP12.02□□□□□ -0.49
CPSF7-211ENST00000477890 AKT2P31751 481 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 CLCN1P35523 988 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 RECQLP46063 649 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-211ENST00000477890 CLDN2P57739 230 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 E2F1Q01094 437 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 DEUP1Q05D60 604 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 CAMK4Q16566 473 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 ZNF284Q2VY69 593 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 ARSIQ5FYB1 569 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 C22orf39Q6P5X5 142 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 LRRC31Q6UY01 552 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 KDM7AQ6ZMT4 941 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 ERN2Q76MJ5 926 aaKnown RBP12.02□□□□□ -0.49
CPSF7-211ENST00000477890 TMC6Q7Z403 805 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 TFAP2DQ7Z6R9 452 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 SETD3Q86TU7 594 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-211ENST00000477890 IRF2BP1Q8IU81 584 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 ZDHHC17Q8IUH5 632 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 CACTIN-AS1Q8N1I8 211 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 DCBLD1Q8N8Z6 715 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 DCAF4L2Q8NA75 395 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 OR13H1Q8NG92 308 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 OR4C6Q8NH72 309 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 SNIP1Q8TAD8 396 aaKnown RBP12.02□□□□□ -0.49
CPSF7-211ENST00000477890 FGF11Q92914 225 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 TBCBQ99426 244 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 PDCL3Q9H2J4 239 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 TNKS2Q9H2K2 1166 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 PRORYQ9H606 182 aa12.02□□□□□ -0.49
CPSF7-211ENST00000477890 CAAP1Q9H8G2 361 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms