RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ARHGAP6O43182 974 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 THAP12O43422 761 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 MED7O43513 233 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 ENDOD1O94919 500 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 ZNF202O95125 648 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 LETM1O95202 739 aaPredicted RBP6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 ADCY5O95622 1261 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 RHOCP08134 193 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 SLC2A3P11169 496 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 C6P13671 934 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 HNRNPA2B1P22626 353 aaKnown RBP6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 RRM1P23921 792 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 CCR1P32246 355 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 USP8P40818 1118 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 ACADSBP45954 432 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 LSSP48449 732 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 DNA2P51530 1060 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 ERVPABLB-1P60509 514 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 HNRNPKP61978 463 aaKnown RBP eCLIP6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 YWHAZP63104 245 aaKnown RBP6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 PITX1P78337 314 aaPredicted RBP6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 KRT83P78385 493 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 CDK17Q00537 523 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 STIM1Q13586 685 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 DRAP1Q14919 205 aaPredicted RBP6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 DEFB133Q30KQ1 61 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 PIP5KL1Q5T9C9 394 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 SEL1L3Q68CR1 1132 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 ANKRD40Q6AI12 368 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 ISM2Q6H9L7 571 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 CXorf57Q6NSI4 855 aaKnown RBP6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 FBXL22Q6P050 247 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 DENND1BQ6P3S1 775 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 GCNT7Q6ZNI0 430 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 RBM44Q6ZP01 1051 aaKnown RBP6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 Q6ZSR6 202 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 EFL1Q7Z2Z2 1120 aaKnown RBP6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 JAMLQ86YT9 394 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 ARHGEF19Q8IW93 802 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 CACTIN-AS1Q8N1I8 211 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 SH2D3CQ8N5H7 860 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 UBR7Q8N806 425 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 FRS2Q8WU20 508 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 SLC35C1Q96A29 364 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 ATXN7L3BQ96GX2 97 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 PPP1R16AQ96I34 528 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 ZSWIM1Q9BR11 485 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 ARHGAP9Q9BRR9 750 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 DUSP23Q9BVJ7 150 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 GTPBP4Q9BZE4 634 aaKnown RBP6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 DPH1Q9BZG8 443 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 TNKS2Q9H2K2 1166 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 GOLPH3LQ9H4A5 285 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 PPM1HQ9ULR3 514 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 COQ4Q9Y3A0 265 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 ATMQ13315 3056 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 PIEZO2Q9H5I5 2752 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 FAM170AA1A519 330 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 CYSRT1A8MQ03 144 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 K7ERQ8 282 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 K7ESM1 405 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 NEMP1O14524 444 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 MCF2LO15068 1137 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 ATP9BO43861 1147 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 SNAP91O60641 907 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 TNFSF15O95150 251 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 PRNPP04156 253 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 GP1BAP07359 652 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 CTSLP07711 333 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 SRCP12931 536 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 TGM2P21980 687 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 GNA15P30679 374 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 CHRNA3P32297 505 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 GPD2P43304 727 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 IRAK1P51617 712 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 PMS1P54277 932 aaKnown RBP6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 TAS2R38P59533 333 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 LRRC63Q05C16 580 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 NFATC3Q12968 1075 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 AUHQ13825 339 aaKnown RBP6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 PDE1CQ14123 709 aaPredicted RBP6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 TAF5Q15542 800 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 TCEA2Q15560 299 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 ISXQ2M1V0 245 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 ZNF284Q2VY69 593 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 ARSIQ5FYB1 569 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 ZNF658Q5TYW1 1059 aaPredicted RBP6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 CDCP2Q5VXM1 449 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 KLHL10Q6JEL2 608 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 ZCCHC8Q6NZY4 707 aaKnown RBP6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 GUSBP11Q6P575 273 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 LINGO4Q6UY18 593 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 HORMAD1Q86X24 394 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 CREBRFQ8IUR6 639 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 PASD1Q8IV76 773 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 DEFB106AQ8N104 65 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 SLC22A18ASQ8N1D0 253 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 RYBPQ8N488 228 aaPredicted RBP6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 ARL14Q8N4G2 192 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms