RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 GLP2RO95838 553 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 VIPP01282 170 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 ACAA1P09110 424 aaPredicted RBP4.55□□□□□ -1.68
UBR3-209ENST00000477461 PPM1AP35813 382 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 NFATC4Q14934 902 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 XRRA1Q6P2D8 792 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 TRILQ7L0X0 811 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 SKAP1Q86WV1 359 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 GPSM1Q86YR5 675 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 SPICE1Q8N0Z3 855 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 IQCF1Q8N6M8 205 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 ZFPM2Q8WW38 1151 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 GLMPQ8WWB7 406 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 PMM1Q92871 262 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 ATP2A3Q93084 1043 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 LRRC59Q96AG4 307 aaKnown RBP4.55□□□□□ -1.68
UBR3-209ENST00000477461 MED30Q96HR3 178 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 NUDT22Q9BRQ3 303 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 WDR83Q9BRX9 315 aaKnown RBP4.55□□□□□ -1.68
UBR3-209ENST00000477461 SF3B5Q9BWJ5 86 aaKnown RBP4.55□□□□□ -1.68
UBR3-209ENST00000477461 FBXO28Q9NVF7 368 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 CEP83Q9Y592 693 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 NRKQ7Z2Y5 1582 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 TRPM3Q9HCF6 1732 aaPredicted RBP4.55□□□□□ -1.68
UBR3-209ENST00000477461 TNS3Q68CZ2 1445 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 SBNO1A3KN83 1393 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 ARHGEF10O15013 1369 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 AHDC1Q5TGY3 1603 aaPredicted RBP4.54□□□□□ -1.68
UBR3-209ENST00000477461 FAM234BA2RU67 622 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 ABCB4P21439 1286 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 TECP42680 631 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 TNNT2P45379 298 aaPredicted RBP4.54□□□□□ -1.68
UBR3-209ENST00000477461 SLC37A1P57057 533 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 SHC2P98077 582 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 LTBQ06643 244 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 NSUN2Q08J23 767 aaKnown RBP eCLIP4.54□□□□□ -1.68
UBR3-209ENST00000477461 ISM2Q6H9L7 571 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 FAM47BQ8NA70 645 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 KAT2AQ92830 837 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 MCRS1Q96EZ8 462 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 WDR12Q9GZL7 423 aaKnown RBP4.54□□□□□ -1.68
UBR3-209ENST00000477461 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.54□□□□□ -1.68
UBR3-209ENST00000477461 ISCUQ9H1K1 167 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 EPS8L2Q9H6S3 715 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 PRKRIP1Q9H875 184 aaPredicted RBP4.54□□□□□ -1.68
UBR3-209ENST00000477461 SIRT3Q9NTG7 399 aaPredicted RBP4.54□□□□□ -1.68
UBR3-209ENST00000477461 DTNAQ9Y4J8 743 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 PXDNQ92626 1479 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 PIK3C2AO00443 1686 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 SSH2Q76I76 1423 aa4.54□□□□□ -1.68
UBR3-209ENST00000477461 MAP2P11137 1827 aaKnown RBP4.53□□□□□ -1.68
UBR3-209ENST00000477461 GOLGA6L3A6NEY3 463 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 J3KTA2 159 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 NPC1O15118 1278 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 DHHO43323 396 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 PPP6R2O75170 966 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 PAPSS2O95340 614 aaPredicted RBP4.53□□□□□ -1.68
UBR3-209ENST00000477461 HYAL1Q12794 435 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 CBFBQ13951 182 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 RAB30Q15771 203 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 INO80DQ53TQ3 878 aaPredicted RBP4.53□□□□□ -1.68
UBR3-209ENST00000477461 ASPHD1Q5U4P2 390 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 CAPRIN2Q6IMN6 1127 aaKnown RBP4.53□□□□□ -1.68
UBR3-209ENST00000477461 MSANTD2Q6P1R3 559 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 LRIG3Q6UXM1 1119 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 CYB5R4Q7L1T6 521 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 SPATA2LQ8IUW3 424 aaPredicted RBP4.53□□□□□ -1.68
UBR3-209ENST00000477461 SYTL1Q8IYJ3 562 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 KCNH5Q8NCM2 988 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 SLC22A17Q8WUG5 538 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 CFAP53Q96M91 514 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 DOCK7Q96N67 2140 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 ERVK-5Q9HDB9 667 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 PLCB1Q9NQ66 1216 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 FSCN3Q9NQT6 498 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 HELLSQ9NRZ9 838 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 PCDHGB2Q9Y5G2 931 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 ALS2Q96Q42 1657 aa4.53□□□□□ -1.68
UBR3-209ENST00000477461 PARD3Q8TEW0 1356 aa4.53□□□□□ -1.69
UBR3-209ENST00000477461 USP54Q70EL1 1684 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 PNMA6EA0A0J9YXQ4 647 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 CXorf65A6NEN9 183 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 CYSRT1A8MQ03 144 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 PODXLO00592 558 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 FFAR2O15552 330 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 CNTN5O94779 1100 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 SGPL1O95470 568 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 NTSR2O95665 410 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 PPP2R1AP30153 589 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 AMPHP49418 695 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 OS9Q13438 667 aaPredicted RBP4.52□□□□□ -1.69
UBR3-209ENST00000477461 BIRC2Q13490 618 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 KIAA1755Q5JYT7 1200 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 FBXO38Q6PIJ6 1188 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 Q6ZTK2 550 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 NR2C2APQ86WQ0 139 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 RASGRP3Q8IV61 690 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 SRFBP1Q8NEF9 429 aaKnown RBP4.52□□□□□ -1.69
UBR3-209ENST00000477461 C7orf57Q8NEG2 295 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 NPIPB3Q92617 1050 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms