RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 NSMCE1Q8WV22 266 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 MUC3BQ9H195 1237 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 ACBD3Q9H3P7 528 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 GLOD4Q9HC38 313 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 ATP13A1Q9HD20 1204 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 E7ESA3 106 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 GLDCP23378 1020 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 OXCT1P55809 520 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 KYNUQ16719 465 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 MPP7Q5T2T1 576 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 MARC1Q5VT66 337 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 GET4Q7L5D6 327 aaPredicted RBP29.4■■■□□ 2.3
VEGFA-211ENST00000476772 CAND1Q86VP6 1230 aaKnown RBP29.4■■■□□ 2.3
VEGFA-211ENST00000476772 MFN1Q8IWA4 741 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 ZBED8Q8IZ13 594 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP29.4■■■□□ 2.3
VEGFA-211ENST00000476772 MLPHQ9BV36 600 aaPredicted RBP29.4■■■□□ 2.3
VEGFA-211ENST00000476772 ACE2Q9BYF1 805 aaPredicted RBP29.4■■■□□ 2.3
VEGFA-211ENST00000476772 FRMD8Q9BZ67 464 aaPredicted RBP29.4■■■□□ 2.3
VEGFA-211ENST00000476772 EIF3HO15372 352 aaKnown RBP eCLIP29.39■■■□□ 2.32e-9■■□□□ 13.7
VEGFA-211ENST00000476772 KDELR3O43731 214 aa29.39■■■□□ 2.3
VEGFA-211ENST00000476772 CACNG3O60359 315 aa29.39■■■□□ 2.3
VEGFA-211ENST00000476772 AVILO75366 819 aa29.39■■■□□ 2.3
VEGFA-211ENST00000476772 GRIA1P42261 906 aa29.39■■■□□ 2.3
VEGFA-211ENST00000476772 CDK16Q00536 496 aa29.39■■■□□ 2.3
VEGFA-211ENST00000476772 ADAM15Q13444 863 aa29.39■■■□□ 2.3
VEGFA-211ENST00000476772 BBS9Q3SYG4 887 aa29.39■■■□□ 2.3
VEGFA-211ENST00000476772 ZNF783Q6ZMS7 281 aa29.39■■■□□ 2.3
VEGFA-211ENST00000476772 MTERF4Q7Z6M4 381 aaKnown RBP29.39■■■□□ 2.3
VEGFA-211ENST00000476772 TEX26Q8N6G2 289 aa29.39■■■□□ 2.3
VEGFA-211ENST00000476772 FGF13Q92913 245 aa29.39■■■□□ 2.3
VEGFA-211ENST00000476772 KIF9Q9HAQ2 790 aa29.39■■■□□ 2.3
VEGFA-211ENST00000476772 AGPSO00116 658 aa29.38■■■□□ 2.29
VEGFA-211ENST00000476772 ALOX15BO15296 676 aa29.38■■■□□ 2.29
VEGFA-211ENST00000476772 ACSL3O95573 720 aa29.38■■■□□ 2.29
VEGFA-211ENST00000476772 CYBBP04839 570 aa29.38■■■□□ 2.29
VEGFA-211ENST00000476772 MZF1P28698 734 aaPredicted RBP29.38■■■□□ 2.29
VEGFA-211ENST00000476772 WEE1P30291 646 aa29.38■■■□□ 2.29
VEGFA-211ENST00000476772 SLC29A2Q14542 456 aa29.38■■■□□ 2.29
VEGFA-211ENST00000476772 LRIT3Q3SXY7 679 aa29.38■■■□□ 2.29
VEGFA-211ENST00000476772 FYB2Q5VWT5 728 aa29.38■■■□□ 2.29
VEGFA-211ENST00000476772 DENND2CQ68D51 928 aa29.38■■■□□ 2.29
VEGFA-211ENST00000476772 CELF5Q8N6W0 485 aaKnown RBP29.38■■■□□ 2.29
VEGFA-211ENST00000476772 OR2W6PQ8NHA6 318 aa29.38■■■□□ 2.29
VEGFA-211ENST00000476772 WDR83Q9BRX9 315 aaKnown RBP29.38■■■□□ 2.29
VEGFA-211ENST00000476772 NT5MQ9NPB1 228 aa29.38■■■□□ 2.29
VEGFA-211ENST00000476772 LMCD1Q9NZU5 365 aa29.38■■■□□ 2.29
VEGFA-211ENST00000476772 TBC1D14Q9P2M4 693 aa29.38■■■□□ 2.29
VEGFA-211ENST00000476772 TTC4O95801 387 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 ETFBP38117 255 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 MMP13P45452 471 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 SPARCL1Q14515 664 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 LBRQ14739 615 aaKnown RBP29.37■■■□□ 2.29
VEGFA-211ENST00000476772 TMCO4Q5TGY1 634 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 RNF43Q68DV7 783 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 ANKMY2Q8IV38 441 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 RSPRY1Q96DX4 576 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 OXNAD1Q96HP4 312 aaPredicted RBP29.37■■■□□ 2.29
VEGFA-211ENST00000476772 LRRC3BQ96PB8 259 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 FCRL5Q96RD9 977 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 LINC00597Q9H2U6 94 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 TTYH1Q9H313 450 aaPredicted RBP29.37■■■□□ 2.29
VEGFA-211ENST00000476772 CLEC4EQ9ULY5 219 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 ACTL7AQ9Y615 435 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 NFS1Q9Y697 457 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 WNT6Q9Y6F9 365 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 AP2A1O95782 977 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 CSKP41240 450 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 IFNAR2P48551 515 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 PRPSAP1Q14558 356 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 FAM78AQ5JUQ0 283 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 KCTD11Q693B1 232 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 TMEM25Q86YD3 366 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 SPATA22Q8NHS9 363 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 UHMK1Q8TAS1 419 aaKnown RBP29.37■■■□□ 2.29
VEGFA-211ENST00000476772 ZNF599Q96NL3 588 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 UBP1Q9NZI7 540 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 CLEC1BQ9P126 229 aa29.37■■■□□ 2.29
VEGFA-211ENST00000476772 HOXB8P17481 243 aaPredicted RBP29.36■■■□□ 2.29
VEGFA-211ENST00000476772 MAGEA3P43357 314 aa29.36■■■□□ 2.29
VEGFA-211ENST00000476772 SARNPP82979 210 aaKnown RBP29.36■■■□□ 2.29
VEGFA-211ENST00000476772 TNK2Q07912 1038 aa29.36■■■□□ 2.29
VEGFA-211ENST00000476772 OLIG2Q13516 323 aa29.36■■■□□ 2.29
VEGFA-211ENST00000476772 AGGF1Q8N302 714 aaeCLIP29.36■■■□□ 2.29
VEGFA-211ENST00000476772 ASB16Q96NS5 453 aa29.36■■■□□ 2.29
VEGFA-211ENST00000476772 RUFY1Q96T51 708 aa29.36■■■□□ 2.29
VEGFA-211ENST00000476772 FEM1AQ9BSK4 669 aa29.36■■■□□ 2.29
VEGFA-211ENST00000476772 XAB2Q9HCS7 855 aaKnown RBP29.36■■■□□ 2.29
VEGFA-211ENST00000476772 OR51B4Q9Y5P0 310 aa29.36■■■□□ 2.29
VEGFA-211ENST00000476772 DYNC1LI1Q9Y6G9 523 aaKnown RBP29.36■■■□□ 2.29
VEGFA-211ENST00000476772 PRRC2BQ5JSZ5 2229 aaKnown RBP29.36■■■□□ 2.29
VEGFA-211ENST00000476772 CBX4O00257 560 aa29.35■■■□□ 2.29
VEGFA-211ENST00000476772 NUDT17P0C025 328 aa29.35■■■□□ 2.29
VEGFA-211ENST00000476772 VIPR2P41587 438 aa29.35■■■□□ 2.29
VEGFA-211ENST00000476772 MAXP61244 160 aa29.35■■■□□ 2.29
VEGFA-211ENST00000476772 LRIG3Q6UXM1 1119 aa29.35■■■□□ 2.29
VEGFA-211ENST00000476772 KLHDC8BQ8IXV7 354 aa29.35■■■□□ 2.29
VEGFA-211ENST00000476772 UBA2Q9UBT2 640 aaPredicted RBP29.35■■■□□ 2.29
VEGFA-211ENST00000476772 ERI2A8K979 691 aaKnown RBP29.34■■■□□ 2.29
VEGFA-211ENST00000476772 TBX10O75333 385 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms