RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ZNF813Q6ZN06 617 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 FASTKD5Q7L8L6 764 aaKnown RBP6.41□□□□□ -1.38
VPS50-212ENST00000476413 FAM47BQ8NA70 645 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 C8orf58Q8NAV2 365 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 HSPH1Q92598 858 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 PERPQ96FX8 193 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 FRG2BQ96QU4 278 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 AGAP2Q99490 1192 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 ITPAQ9BY32 194 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 PEMTQ9UBM1 199 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 PSAT1Q9Y617 370 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 CYP2D7A0A087X1C5 515 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 ZBED4O75132 1171 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 SCGB1D1O95968 90 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 IGLV2-14P01704 120 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 COX7A2P14406 83 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 ABCD1P33897 745 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 INHBCP55103 352 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 SETQ01105 290 aaPredicted RBP6.4□□□□□ -1.38
VPS50-212ENST00000476413 PRKG2Q13237 762 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 DCTN2Q13561 401 aaKnown RBP6.4□□□□□ -1.38
VPS50-212ENST00000476413 FHL2Q14192 279 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 MEA1Q16626 185 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 TMEM119Q4V9L6 283 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 FAM171A1Q5VUB5 890 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 TBC1D9BQ66K14 1250 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 TMEM81Q6P7N7 255 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 C16orf71Q8IYS4 520 aaPredicted RBP6.4□□□□□ -1.38
VPS50-212ENST00000476413 CNTROBQ8N137 903 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 ADSSL1Q8N142 457 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 CPXM2Q8N436 756 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 WIPF2Q8TF74 440 aaPredicted RBP6.4□□□□□ -1.38
VPS50-212ENST00000476413 KIF1BPQ96EK5 621 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.4□□□□□ -1.38
VPS50-212ENST00000476413 PCED1AQ9H1Q7 454 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 CXorf56Q9H5V9 222 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 MOV10Q9HCE1 1003 aaKnown RBP6.4□□□□□ -1.38
VPS50-212ENST00000476413 KRT84Q9NSB2 600 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 MPP6Q9NZW5 540 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 TNFSF13BQ9Y275 285 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 INSL6Q9Y581 213 aa6.4□□□□□ -1.38
VPS50-212ENST00000476413 RUSC2Q8N2Y8 1516 aa6.4□□□□□ -1.39
VPS50-212ENST00000476413 ANKRD18BA2A2Z9 1011 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 DYTNA2CJ06 578 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 PROP1O75360 226 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 NEURL1O76050 574 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 CENPBP07199 599 aaPredicted RBP6.39□□□□□ -1.39
VPS50-212ENST00000476413 LAMP2P13473 410 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 STAT1P42224 750 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 DRG2P55039 364 aaKnown RBP6.39□□□□□ -1.39
VPS50-212ENST00000476413 RPS3AP61247 264 aaKnown RBP6.39□□□□□ -1.39
VPS50-212ENST00000476413 ZXDAP98168 799 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 C5orf22Q49AR2 442 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 ITPRIPL1Q6GPH6 555 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 CPLX4Q7Z7G2 160 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 OSR1Q8TAX0 266 aaPredicted RBP6.39□□□□□ -1.39
VPS50-212ENST00000476413 KAT2BQ92831 832 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 PIP5K1AQ99755 562 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 PIMREGQ9BSJ6 248 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 HEMGNQ9BXL5 484 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 SCAND2PQ9GZW5 306 aaPredicted RBP6.39□□□□□ -1.39
VPS50-212ENST00000476413 PDCL3Q9H2J4 239 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 RANBP17Q9H2T7 1088 aaKnown RBP6.39□□□□□ -1.39
VPS50-212ENST00000476413 ZNF304Q9HCX3 659 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 ATP8A2Q9NTI2 1148 aa6.39□□□□□ -1.39
VPS50-212ENST00000476413 TMEM247A6NEH6 219 aa6.38□□□□□ -1.39
VPS50-212ENST00000476413 C2CD4BA6NLJ0 364 aa6.38□□□□□ -1.39
VPS50-212ENST00000476413 IFNL4K9M1U5 179 aa6.38□□□□□ -1.39
VPS50-212ENST00000476413 STRNO43815 780 aa6.38□□□□□ -1.39
VPS50-212ENST00000476413 SERPINC1P01008 464 aa6.38□□□□□ -1.39
VPS50-212ENST00000476413 TFEBP19484 476 aa6.38□□□□□ -1.39
VPS50-212ENST00000476413 PSMA4P25789 261 aaKnown RBP6.38□□□□□ -1.39
VPS50-212ENST00000476413 PKP1Q13835 747 aa6.38□□□□□ -1.39
VPS50-212ENST00000476413 EIF4A2Q14240 407 aaKnown RBP6.38□□□□□ -1.39
VPS50-212ENST00000476413 EARS2Q5JPH6 523 aaKnown RBP6.38□□□□□ -1.39
VPS50-212ENST00000476413 ZNF782Q6ZMW2 699 aaPredicted RBP6.38□□□□□ -1.39
VPS50-212ENST00000476413 ZNF66Q6ZN08 573 aa6.38□□□□□ -1.39
VPS50-212ENST00000476413 TRIM74Q86UV6 250 aa6.38□□□□□ -1.39
VPS50-212ENST00000476413 TRIM73Q86UV7 250 aa6.38□□□□□ -1.39
VPS50-212ENST00000476413 KLHL15Q96M94 604 aa6.38□□□□□ -1.39
VPS50-212ENST00000476413 NEUROD6Q96NK8 337 aa6.38□□□□□ -1.39
VPS50-212ENST00000476413 GLIS2Q9BZE0 524 aaPredicted RBP6.38□□□□□ -1.39
VPS50-212ENST00000476413 GRHL1Q9NZI5 618 aa6.38□□□□□ -1.39
VPS50-212ENST00000476413 IL1RAPL1Q9NZN1 696 aa6.38□□□□□ -1.39
VPS50-212ENST00000476413 MST1RQ04912 1400 aa6.38□□□□□ -1.39
VPS50-212ENST00000476413 KAT6BQ8WYB5 2073 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 TEX13CA0A0J9YWL9 993 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 WIPF3A6NGB9 483 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 LINC01548A6NM66 108 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 K7ENM7 598 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 MSI1O43347 362 aaKnown RBP6.37□□□□□ -1.39
VPS50-212ENST00000476413 TACC1O75410 805 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 CBX6O95503 412 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 LATS1O95835 1130 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 HSPA1AP0DMV8 641 aaKnown RBP6.37□□□□□ -1.39
VPS50-212ENST00000476413 HSPA1BP0DMV9 641 aaKnown RBP6.37□□□□□ -1.39
VPS50-212ENST00000476413 ARL1P40616 181 aaPredicted RBP6.37□□□□□ -1.39
VPS50-212ENST00000476413 BLKP51451 505 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 CFHR1Q03591 330 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 ME3Q16798 604 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms