RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 C12orf43Q96C57 262 aaKnown RBP8.54□□□□□ -1.04
VAPB-205ENST00000476395 KLHL32Q96NJ5 620 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 EBNA1BP2Q99848 306 aaKnown RBP8.54□□□□□ -1.04
VAPB-205ENST00000476395 CNPY3Q9BT09 278 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 TRPV5Q9NQA5 729 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 TBCCD1Q9NVR7 557 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 RIMS3Q9UJD0 308 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 PSMD12O00232 456 aaPredicted RBP8.54□□□□□ -1.04
VAPB-205ENST00000476395 GCATO75600 419 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 NDST1P52848 882 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 GNA12Q03113 381 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 PPP2R5DQ14738 602 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 HADHQ16836 314 aaKnown RBP8.54□□□□□ -1.04
VAPB-205ENST00000476395 PDCD4Q53EL6 469 aaKnown RBP8.54□□□□□ -1.04
VAPB-205ENST00000476395 FAM219BQ5XKK7 198 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 MAMDC4Q6UXC1 1216 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 FBXW8Q8N3Y1 598 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 TMEM151AQ8N4L1 468 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 SLC35F5Q8WV83 523 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 TANKQ92844 425 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 SNX27Q96L92 541 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 ZMAT2Q96NC0 199 aaKnown RBP8.54□□□□□ -1.04
VAPB-205ENST00000476395 SLC4A5Q9BY07 1137 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 RNPEPQ9H4A4 650 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 PLGRKTQ9HBL7 147 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 XAB2Q9HCS7 855 aaKnown RBP8.54□□□□□ -1.04
VAPB-205ENST00000476395 TMPRSS4Q9NRS4 437 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 TSPAN16Q9UKR8 245 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 TNFSF13BQ9Y275 285 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 PCDHA11Q9Y5I1 949 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 NOP56O00567 594 aaKnown RBP8.53□□□□□ -1.04
VAPB-205ENST00000476395 C22orf31O95567 290 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 UGT1A6P19224 532 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 UGT1A1P22309 533 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 UGT1A4P22310 534 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 UGT1A3P35503 534 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 UGT1A5P35504 534 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 MAGEA12P43365 314 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 RPL34P49207 117 aaKnown RBP8.53□□□□□ -1.04
VAPB-205ENST00000476395 GMPSP49915 693 aaPredicted RBP8.53□□□□□ -1.04
VAPB-205ENST00000476395 CDK9P50750 372 aaKnown RBP8.53□□□□□ -1.04
VAPB-205ENST00000476395 CLCN3P51790 818 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 PRAMEP78395 509 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 STX3Q13277 289 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 CDO1Q16878 200 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 NCBP2-AS2Q69YL0 99 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 METTL7BQ6UX53 244 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 NAPRTQ6XQN6 538 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 CHST15Q7LFX5 561 aaPredicted RBP8.53□□□□□ -1.04
VAPB-205ENST00000476395 BNIPLQ7Z465 357 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 PYROXD2Q8N2H3 581 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 ACVR1CQ8NER5 493 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 PPP1R14BQ96C90 147 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 ISOC1Q96CN7 298 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 LRGUKQ96M69 825 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 ADPGKQ9BRR6 497 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 ZNF358Q9NW07 568 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 PIH1D1Q9NWS0 290 aaKnown RBP8.53□□□□□ -1.04
VAPB-205ENST00000476395 EPS15L1Q9UBC2 864 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 PLXNB2O15031 1838 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 I6L893 689 aaPredicted RBP8.53□□□□□ -1.04
VAPB-205ENST00000476395 SPAG6O75602 509 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 CLIC3O95833 236 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 ZBED1O96006 694 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 APRTP07741 180 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 GNAO1P09471 354 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 STAG3L1P0CL83 205 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 PDGFRAP16234 1089 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 OSBPP22059 807 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 TCEA1P23193 301 aaKnown RBP8.53□□□□□ -1.04
VAPB-205ENST00000476395 SERPINB5P36952 375 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 DPP6P42658 865 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 PDAP1Q13442 181 aaKnown RBP8.53□□□□□ -1.04
VAPB-205ENST00000476395 SEMA5AQ13591 1074 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 PPM1JQ5JR12 505 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 THOC7Q6I9Y2 204 aaKnown RBP8.53□□□□□ -1.04
VAPB-205ENST00000476395 EEPD1Q7L9B9 569 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 CCDC185Q8N715 623 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 MAPK15Q8TD08 544 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 CPB2Q96IY4 423 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 PLEKHA8Q96JA3 519 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 MARK4Q96L34 752 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 MRPL45Q9BRJ2 306 aaKnown RBP8.53□□□□□ -1.04
VAPB-205ENST00000476395 TPK1Q9H3S4 243 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 NRDE2Q9H7Z3 1164 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 PAK5Q9P286 719 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 PSMD13Q9UNM6 376 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 SPO11Q9Y5K1 396 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 LTBP3Q9NS15 1303 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 GOLGA8QA0A0J9YX86 632 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 GOLGA8OA6NCC3 632 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 F5H423 210 aaPredicted RBP8.53□□□□□ -1.04
VAPB-205ENST00000476395 GOLGA8NF8WBI6 632 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 MDM4O15151 490 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 BIRC5O15392 142 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 RNASEH2AO75792 299 aaKnown RBP8.53□□□□□ -1.04
VAPB-205ENST00000476395 IDO1P14902 403 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 TCF3P15923 654 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 TGM2P21980 687 aa8.53□□□□□ -1.04
VAPB-205ENST00000476395 NUMBP49757 651 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms