RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 NR1H2P55055 460 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 RALGPS1Q5JS13 557 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 MFSD14CQ5VZR4 134 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 ARHGEF19Q8IW93 802 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 GLIS1Q8NBF1 620 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 NSMCE2Q96MF7 247 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 SLC9A7Q96T83 725 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 TMEM47Q9BQJ4 181 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 NUAK2Q9H093 628 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 HMG20AQ9NP66 347 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 TRPM5Q9NZQ8 1165 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 POLG2Q9UHN1 485 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 UBE2QL1A1L167 161 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 EFCAB10A6NFE3 127 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 C2orf81A6NN90 581 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 CLOCKO15516 846 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 DGAT1O75907 488 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 DHRS4L1P0CG22 281 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 TGM2P21980 687 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 EPS8Q12929 822 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 SAPCD2Q86UD0 394 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 OSCP1Q8WVF1 389 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 NMRK2Q9NPI5 230 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 PIN4Q9Y237 131 aaKnown RBP11.69□□□□□ -0.54
U2AF1-209ENST00000475639 MAST2Q6P0Q8 1798 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 CRTAMO95727 393 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 PRKCBP05771 671 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 FAM58BPP0C7Q3 252 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 ETV4P43268 484 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 HARS2P49590 506 aaKnown RBP11.69□□□□□ -0.54
U2AF1-209ENST00000475639 SRP54P61011 504 aaKnown RBP11.69□□□□□ -0.54
U2AF1-209ENST00000475639 DGUOKQ16854 277 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 C12orf60Q5U649 245 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 AMIGO2Q86SJ2 522 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 PPIL6Q8IXY8 311 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 TMIGD2Q96BF3 282 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 SPATA33Q96N06 139 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 BIRC8Q96P09 236 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 SLC38A7Q9NVC3 462 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 ATP6V1HQ9UI12 483 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 NHSL1Q5SYE7 1610 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 USP17L5A8MUK1 530 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 USP17L10C9JJH3 530 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 EXTL3O43909 919 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 CCNT2O60583 730 aaKnown RBP11.69□□□□□ -0.54
U2AF1-209ENST00000475639 CCDC130P13994 396 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 BCAP31P51572 246 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 ARHGDIBP52566 201 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 DGKDQ16760 1214 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 SEL1L3Q68CR1 1132 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 LZTR1Q8N653 840 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 SPPL2AQ8TCT8 520 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 GPR101Q96P66 508 aaPredicted RBP11.69□□□□□ -0.54
U2AF1-209ENST00000475639 NT5C1AQ9BXI3 368 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 NCKIPSDQ9NZQ3 722 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 GSTK1Q9Y2Q3 226 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 TMEM114B3SHH9 223 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 PMPCBO75439 489 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 BANF1O75531 89 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 FUCA1P04066 466 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 UBAP2LQ14157 1087 aaKnown RBP11.68□□□□□ -0.54
U2AF1-209ENST00000475639 ZNF423Q2M1K9 1284 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 FAM98BQ52LJ0 330 aaKnown RBP11.68□□□□□ -0.54
U2AF1-209ENST00000475639 CAMKK1Q8N5S9 505 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 SCAIQ8N9R8 606 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 FRMD6Q96NE9 622 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 FAM111AQ96PZ2 611 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 REEP2Q9BRK0 252 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 RUSC1Q9BVN2 902 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 ELOVL6Q9H5J4 265 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 ACAD9Q9H845 621 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 KCNK4Q9NYG8 393 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 E2F8A0AVK6 867 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 WTIPA6NIX2 430 aaPredicted RBP11.68□□□□□ -0.54
U2AF1-209ENST00000475639 TGFB1I1O43294 461 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 CD4P01730 458 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 DSG3P32926 999 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 ALDH1A3P47895 512 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 C21orf59P57076 290 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 CENPCQ03188 943 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 CCDC153Q494R4 210 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 MZT2BQ6NZ67 158 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 MIEF1Q9NQG6 463 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 COMMD8Q9NX08 183 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 AHSPQ9NZD4 102 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 ARHGAP28Q9P2N2 729 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 AP4B1Q9Y6B7 739 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 BAIAP3O94812 1187 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 DDHD2O94830 711 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 RBP1P09455 135 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 CYP2C8P10632 490 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 GPX6P59796 221 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 CREB5Q02930 508 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 SPP2Q13103 211 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 TSNQ15631 228 aaKnown RBP11.68□□□□□ -0.54
U2AF1-209ENST00000475639 XKR3Q5GH77 459 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 C6orf183Q5T699 404 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 ALLCQ8N6M5 410 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 ETNPPLQ8TBG4 499 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 ACTR8Q9H981 624 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms