RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 SLC2A6Q9UGQ3 507 aa14.34□□□□□ -0.11
UBXN11-214ENST00000475591 ADAM28Q9UKQ2 775 aa14.34□□□□□ -0.11
UBXN11-214ENST00000475591 PRG3Q9Y2Y8 225 aaPredicted RBP14.34□□□□□ -0.11
UBXN11-214ENST00000475591 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.33□□□□□ -0.12
UBXN11-214ENST00000475591 PMPCBO75439 489 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 HLA-DQB2P05538 268 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 SERPINA6P08185 405 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 GABRB3P28472 473 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 CCR1P32246 355 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 GRK4P32298 578 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 PGM1P36871 562 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 TUBP50607 506 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 INHBEP58166 350 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 ABCE1P61221 599 aaKnown RBP14.33□□□□□ -0.12
UBXN11-214ENST00000475591 ZNF460Q14592 562 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 NAPEPLDQ6IQ20 393 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 DENND6AQ8IWF6 608 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 TTC9BQ8N6N2 239 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 POU5F2Q8N7G0 328 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 TBL1YQ9BQ87 522 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 SHCBP1LQ9BZQ2 653 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 UNKQ9C0B0 810 aaKnown RBP14.33□□□□□ -0.12
UBXN11-214ENST00000475591 HS3ST4Q9Y661 456 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 CA12O43570 354 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 CCNCP24863 283 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 CHRNA4P43681 627 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 CCR10P46092 362 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 IDH3AP50213 366 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 ZNF135P52742 658 aaPredicted RBP14.33□□□□□ -0.12
UBXN11-214ENST00000475591 MPP1Q00013 466 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 CLLU1OSQ5K130 101 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 DENND5AQ6IQ26 1287 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 ESRP1Q6NXG1 681 aaKnown RBP14.33□□□□□ -0.12
UBXN11-214ENST00000475591 CLEC14AQ86T13 490 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 SCML4Q8N228 414 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 ZNF781Q8N8C0 355 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 ENDOVQ8N8Q3 282 aaKnown RBP14.33□□□□□ -0.12
UBXN11-214ENST00000475591 TSGA13Q96PP4 275 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 HAPLN3Q96S86 360 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 FTHL17Q9BXU8 183 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 GLOD4Q9HC38 313 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 DNAJB4Q9UDY4 337 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 TAGLN3Q9UI15 199 aa14.33□□□□□ -0.12
UBXN11-214ENST00000475591 NYNRINQ9P2P1 1898 aaKnown RBP14.32□□□□□ -0.12
UBXN11-214ENST00000475591 E9PAM4 449 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 TK2O00142 265 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 ZNF195O14628 629 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 CACNG3O60359 315 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 SOAT2O75908 522 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 GLRBP48167 497 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 USP46P62068 366 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 COG7P83436 770 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 CDK18Q07002 472 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 CTBP1Q13363 440 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 MBTPS1Q14703 1052 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 DBN1Q16643 649 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 RABGAP1LQ5R372 815 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 TFAP2DQ7Z6R9 452 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 PNPLA1Q8N8W4 532 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 PPP4R1Q8TF05 950 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 LINC01599Q8WXQ3 324 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 FAM161BQ96MY7 647 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 KIFC1Q9BW19 673 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 MAN1C1Q9NR34 630 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 MAGEB16A2A368 324 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 TMEM88BA6NKF7 163 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 AHSGP02765 367 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 HOXC13P31276 330 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 ELF1P32519 619 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 OR1G1P47890 313 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 PTDSS1P48651 473 aaKnown RBP14.32□□□□□ -0.12
UBXN11-214ENST00000475591 PAPOLAP51003 745 aaKnown RBP14.32□□□□□ -0.12
UBXN11-214ENST00000475591 RCN1Q15293 331 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 MAPRE1Q15691 268 aaKnown RBP14.32□□□□□ -0.12
UBXN11-214ENST00000475591 CCDC153Q494R4 210 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 BRMS1LQ5PSV4 323 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 PIK3R6Q5UE93 754 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 RAPH1Q70E73 1250 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 ZC3HC1Q86WB0 502 aaKnown RBP14.32□□□□□ -0.12
UBXN11-214ENST00000475591 SLC41A1Q8IVJ1 513 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 SPATA6LQ8N4H0 392 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 GPATCH11Q8N954 259 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 OR6Y1Q8NGX8 325 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 DTX3LQ8TDB6 740 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 B3GALT6Q96L58 329 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 IL12RB2Q99665 862 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 TRPV6Q9H1D0 765 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 RBM22Q9NW64 420 aaKnown RBP eCLIP14.32□□□□□ -0.12
UBXN11-214ENST00000475591 PLA2G4CQ9UP65 541 aa14.32□□□□□ -0.12
UBXN11-214ENST00000475591 MYLKQ15746 1914 aa14.31□□□□□ -0.12
UBXN11-214ENST00000475591 PATJQ8NI35 1801 aa14.31□□□□□ -0.12
UBXN11-214ENST00000475591 EIF4E1BA6NMX2 242 aaKnown RBP14.31□□□□□ -0.12
UBXN11-214ENST00000475591 SPECC1L-ADORA2AF8WAN1 911 aa14.31□□□□□ -0.12
UBXN11-214ENST00000475591 MATN3O15232 486 aa14.31□□□□□ -0.12
UBXN11-214ENST00000475591 VAPBO95292 243 aa14.31□□□□□ -0.12
UBXN11-214ENST00000475591 ARNTP27540 789 aa14.31□□□□□ -0.12
UBXN11-214ENST00000475591 HARS2P49590 506 aaKnown RBP14.31□□□□□ -0.12
UBXN11-214ENST00000475591 SREBF2Q12772 1141 aa14.31□□□□□ -0.12
UBXN11-214ENST00000475591 PCSK7Q16549 785 aa14.31□□□□□ -0.12
UBXN11-214ENST00000475591 MFSD6LQ8IWD5 586 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms