RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 CDK7P50613 346 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 NIPAL4Q0D2K0 466 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 PDE1CQ14123 709 aaPredicted RBP12.68□□□□□ -0.38
RNF220-211ENST00000474956 PDK1Q15118 436 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 DBN1Q16643 649 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 PACS1Q6VY07 963 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 CNTD1Q8N815 330 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 UNKQ9C0B0 810 aaKnown RBP12.68□□□□□ -0.38
RNF220-211ENST00000474956 ATXN3LQ9H3M9 355 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 ZDHHC7Q9NXF8 308 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 MPP6Q9NZW5 540 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 NLRC5Q86WI3 1866 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 A0A088AWK7 358 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 TTC24A2A3L6 582 aaPredicted RBP12.68□□□□□ -0.38
RNF220-211ENST00000474956 SEPT4O43236 478 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 MYCP01106 439 aaPredicted RBP12.68□□□□□ -0.38
RNF220-211ENST00000474956 PRKCGP05129 697 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 GRK4P32298 578 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 CPOXP36551 454 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 GATMP50440 423 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 DDR2Q16832 855 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 INTS6LQ5JSJ4 861 aaKnown RBP12.68□□□□□ -0.38
RNF220-211ENST00000474956 FAM219BQ5XKK7 198 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 LRRC8BQ6P9F7 803 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 ACAD11Q709F0 780 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 EGFL6Q8IUX8 553 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 SCN4BQ8IWT1 228 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 RSPH1Q8WYR4 309 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 CASP10Q92851 521 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 ZNF669Q96BR6 464 aaPredicted RBP12.68□□□□□ -0.38
RNF220-211ENST00000474956 PKMYT1Q99640 499 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 SPATA16Q9BXB7 569 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 OXCT2Q9BYC2 517 aaPredicted RBP12.68□□□□□ -0.38
RNF220-211ENST00000474956 VCX3BQ9H321 246 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 XAB2Q9HCS7 855 aaKnown RBP12.68□□□□□ -0.38
RNF220-211ENST00000474956 S100A14Q9HCY8 104 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 VCX3AQ9NNX9 186 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 NEU3Q9UQ49 428 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 SLC4A7Q9Y6M7 1214 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 MYLKQ15746 1914 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 GPR182O15218 404 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 OPHN1O60890 802 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 USP1O94782 785 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 SERPINB9P50453 376 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 IRF9Q00978 393 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 LIN52Q52LA3 116 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 NOMO2Q5JPE7 1267 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 OVOS1Q6IE37 1185 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 RSPH3Q86UC2 560 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 ST13P4Q8IZP2 240 aaPredicted RBP12.68□□□□□ -0.38
RNF220-211ENST00000474956 TNS4Q8IZW8 715 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 PLD6Q8N2A8 252 aaKnown RBP12.68□□□□□ -0.38
RNF220-211ENST00000474956 DNAAF3Q8N9W5 541 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 NCSTNQ92542 709 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 EBF4Q9BQW3 602 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 STN1Q9H668 368 aaKnown RBP12.68□□□□□ -0.38
RNF220-211ENST00000474956 NOD1Q9Y239 953 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 GIT1Q9Y2X7 761 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 PTPRDP23468 1912 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 A0A0U1RQF3 1178 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.67□□□□□ -0.38
RNF220-211ENST00000474956 KLHL2O95198 593 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 SLC5A3P53794 718 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 UBAP2LQ14157 1087 aaKnown RBP12.67□□□□□ -0.38
RNF220-211ENST00000474956 CNPY1Q3B7I2 92 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 MFSD14CQ5VZR4 134 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 FAM171BQ6P995 826 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 DHDDSQ86SQ9 333 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 RASSF3Q86WH2 238 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 SLC25A41Q8N5S1 370 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 OR6Y1Q8NGX8 325 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 PPP1R14CQ8TAE6 165 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 ZSCAN18Q8TBC5 510 aaPredicted RBP12.67□□□□□ -0.38
RNF220-211ENST00000474956 LINC01599Q8WXQ3 324 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 ABI2Q9NYB9 513 aaPredicted RBP12.67□□□□□ -0.38
RNF220-211ENST00000474956 UNC80Q8N2C7 3258 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 ARHGAP42A6NI28 874 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 ODC1P11926 461 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 DSC3Q14574 896 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 HSP90AA5PQ58FG0 334 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 ARTNQ5T4W7 220 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 N4BP2L1Q5TBK1 243 aaPredicted RBP12.67□□□□□ -0.38
RNF220-211ENST00000474956 SCD5Q86SK9 330 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 C14orf80Q86SX3 495 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 PDSS2Q86YH6 399 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 TMEM86AQ8N2M4 240 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 SHKBP1Q8TBC3 707 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 PIWIL2Q8TC59 973 aaKnown RBP12.67□□□□□ -0.38
RNF220-211ENST00000474956 CSNK1G1Q9HCP0 422 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 HACD1B0YJ81 288 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 TBX18O95935 607 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 SAT1P21673 171 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 FDFT1P37268 417 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 GRIK1P39086 918 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 GARSP41250 739 aaKnown RBP12.67□□□□□ -0.38
RNF220-211ENST00000474956 CXCR3P49682 368 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 USP46P62068 366 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 SLC5A9Q2M3M2 681 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 SLC39A12Q504Y0 691 aa12.67□□□□□ -0.38
RNF220-211ENST00000474956 CFAP157Q5JU67 520 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms