RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 GGA2Q9UJY4 613 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 PACSIN2Q9UNF0 486 aaPredicted RBP7.17□□□□□ -1.26
LIMD1-204ENST00000474665 STARD13Q9Y3M8 1113 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 RAI2Q9Y5P3 530 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 ACTL7AQ9Y615 435 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 USP9XQ93008 2570 aaPredicted RBP7.17□□□□□ -1.26
LIMD1-204ENST00000474665 CACNA1EQ15878 2313 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 HECTD1Q9ULT8 2610 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 ILVBLA1L0T0 632 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 TBC1D3BA6NDS4 549 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 WASH3PC4AMC7 463 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 H0Y626 953 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 DDX3YO15523 660 aaKnown RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 PSTPIP1O43586 416 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 SPOPO43791 374 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 RNF40O75150 1001 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 MT-CO1P00395 513 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 APODP05090 189 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 KRT7P08729 469 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 TNNT1P13805 278 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 ERCC2P18074 760 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 DRD1P21728 446 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 CTNNA2P26232 953 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 CTNNA1P35221 906 aaKnown RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 ACVRL1P37023 503 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 CDKN2BP42772 138 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 SSR1P43307 286 aaKnown RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 TNFRSF4P43489 277 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 RPS9P46781 194 aaKnown RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 STK19P49842 368 aaPredicted RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 SEC13P55735 322 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 TPI1P60174 286 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 AMPD2Q01433 879 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 GRSF1Q12849 480 aaKnown RBP eCLIP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 SLC10A2Q12908 348 aaPredicted RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 ZNF177Q13360 481 aaPredicted RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 CDH18Q13634 790 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 ENPP2Q13822 863 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 LLGL1Q15334 1064 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 C2orf27AQ580R0 203 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 DGKKQ5KSL6 1271 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 TTC39BQ5VTQ0 682 aaPredicted RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 RNF219Q5W0B1 726 aaPredicted RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 MBLAC2Q68D91 279 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 AADACL2Q6P093 401 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 ZNF605Q86T29 641 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 DAAM2Q86T65 1068 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 SETD3Q86TU7 594 aaPredicted RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 RHOT1Q8IXI2 618 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 KATNAL2Q8IYT4 538 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 UMODL1-AS1Q8N2C9 162 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 ALLCQ8N6M5 410 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 KIAA1524Q8TCG1 905 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 CYB5D2Q8WUJ1 264 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 ZNF419Q96HQ0 510 aaPredicted RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 HES6Q96HZ4 224 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 NELL2Q99435 816 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 ACE2Q9BYF1 805 aaPredicted RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 CHRDQ9H2X0 955 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 MTG2Q9H4K7 406 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 LRRC19Q9H756 370 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 ELOVL2Q9NXB9 296 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 TRMT1Q9NXH9 659 aaKnown RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 KIAA1522Q9P206 1035 aaPredicted RBP7.16□□□□□ -1.26
LIMD1-204ENST00000474665 DNAI1Q9UI46 699 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 SLCO3A1Q9UIG8 710 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 MSRB2Q9Y3D2 182 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 NEUROG3Q9Y4Z2 214 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 PCDHA3Q9Y5H8 950 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 LAMA1P25391 3075 aa7.16□□□□□ -1.26
LIMD1-204ENST00000474665 ANKRD36A6QL64 1941 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 A0A1W2PQF6 199 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 LRRD1A4D1F6 860 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 C4orf47A7E2U8 309 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 RASA4BC9J798 803 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 K7ERQ8 282 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 SGK1O00141 431 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 NCAM2O15394 837 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 FGF10O15520 208 aaPredicted RBP7.15□□□□□ -1.26
LIMD1-204ENST00000474665 RASA4O43374 803 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 SMAD6O43541 496 aaKnown RBP7.15□□□□□ -1.26
LIMD1-204ENST00000474665 KRT86O43790 486 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 ZNF821O75541 412 aaPredicted RBP7.15□□□□□ -1.26
LIMD1-204ENST00000474665 KLF8O95600 359 aaPredicted RBP7.15□□□□□ -1.26
LIMD1-204ENST00000474665 KRT1P04264 644 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 RHOCP08134 193 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 PYGMP11217 842 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 KRT10P13645 584 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 HLA-EP13747 358 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 PRKCHP24723 683 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 OR1E1P30953 314 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 HTR7P34969 479 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 TIE1P35590 1138 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 MAPKAPK2P49137 400 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 NAP1L1P55209 391 aaKnown RBP7.15□□□□□ -1.26
LIMD1-204ENST00000474665 ARF5P84085 180 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 GNA12Q03113 381 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms