RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 HDHD5Q9BXW7 423 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 SPAG4Q9NPE6 437 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 ITM2CQ9NQX7 267 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 ANAPC4Q9UJX5 808 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 RCE1Q9Y256 329 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 A0A0G2JK05 382 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 VWA3AA6NCI4 1184 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 OR6C68A6NDL8 312 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 ZNF814B7Z6K7 855 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 B9A039 149 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 STX16-NPEPL1H3BU86 382 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 STX16O14662 325 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 TMCC1O94876 653 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 NTN1O95631 604 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 CSF1P09603 554 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 WEE2P0C1S8 567 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 KRTAP5-9P26371 169 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 TKTP29401 623 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 PSMC2P35998 433 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 ARHGAP8P85298 464 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 BYSLQ13895 437 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 GJB7Q6PEY0 223 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 ZNF517Q6ZMY9 492 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 SCAIQ8N9R8 606 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 ZMIZ2Q8NF64 920 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 IGFBPL1Q8WX77 278 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 HERVK_113Q902F9 699 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 VCPIP1Q96JH7 1222 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 FOXP1Q9H334 677 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 HIPK3Q9H422 1215 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 TTC12Q9H892 705 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 RIC8AQ9NPQ8 531 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 ENTPD7Q9NQZ7 604 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 ZDHHC7Q9NXF8 308 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 GRHL1Q9NZI5 618 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 UPB1Q9UBR1 384 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 SLC13A4Q9UKG4 626 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 LRP12Q9Y561 859 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 CLDN16Q9Y5I7 305 aa3.56□□□□□ -1.84
ECHDC1-213ENST00000474240 MST1RQ04912 1400 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 TRBV5-7A0A0A0MS05 114 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 GOLGA6L10A0A0M3HER8 536 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 EIF3FO00303 357 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 NPHP1O15259 732 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 EPN2O95208 641 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 DDAH2O95865 285 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 IFIT1P09914 478 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 CYP19A1P11511 503 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 FCGR2AP12318 317 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 PEPDP12955 493 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 ARSAP15289 507 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 KLRC2P26717 231 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 GPR12P47775 334 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 CHRNDQ07001 517 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 Q5PR19 223 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 DAB2IPQ5VWQ8 1189 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 ATG16L1Q676U5 607 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 PDXDC1Q6P996 788 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 PARM1Q6UWI2 310 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 COLCA1Q6ZS62 124 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 B4GALNT4Q76KP1 1039 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 LRRC8DQ7L1W4 858 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 TECPR1Q7Z6L1 1165 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 WDR5BQ86VZ2 330 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 TMEM163Q8TC26 289 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 C2CD4CQ8TF44 421 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 IP6K1Q92551 441 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 KAT2AQ92830 837 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 OTULINQ96BN8 352 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 ZNF419Q96HQ0 510 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 UBXN10Q96LJ8 280 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 TBATAQ96M53 351 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 REEP2Q9BRK0 252 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 ARHGAP39Q9C0H5 1083 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 SPRTNQ9H040 489 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 IL21RQ9HBE5 538 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 ALKBH4Q9NXW9 302 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 PGAP2Q9UHJ9 254 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 GJD2Q9UKL4 321 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 FBXO4Q9UKT5 387 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 GTF2A1LQ9UNN4 478 aa3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 LRRFIP2Q9Y608 721 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-213ENST00000474240 A0A096LPK6 155 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 TCRBV7S3A2A0A539 114 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 PEX12O00623 359 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 DHX16O60231 1041 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 ATG13O75143 517 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 NDUFB8O95169 186 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 CHRM4P08173 479 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 PSG1P11464 419 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 UNGP13051 313 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 ENO3P13929 434 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 XBP1P17861 261 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 CDC25AP30304 524 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 POLD2P49005 469 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 BLKP51451 505 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms