RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 POU6F1Q14863 301 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 OASLQ15646 514 aaKnown RBP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC18A3Q16572 532 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 DUSP7Q16829 419 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 GRAMD1BQ3KR37 738 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 C5orf22Q49AR2 442 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 PPM1LQ5SGD2 360 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 DENND5AQ6IQ26 1287 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 RAVER1Q8IY67 606 aaKnown RBP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 KIAA1958Q8N8K9 716 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 LRRC57Q8N9N7 239 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 KREMEN2Q8NCW0 462 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 PIWIL2Q8TC59 973 aaKnown RBP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC2A14Q8TDB8 520 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 COPS5Q92905 334 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 C12orf43Q96C57 262 aaKnown RBP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 DCUN1D1Q96GG9 259 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 SCLYQ96I15 445 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 SCYL1Q96KG9 808 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 GCNAQ96QF7 691 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 ALPK1Q96QP1 1244 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 SECISBP2Q96T21 854 aaKnown RBP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 TSG101Q99816 390 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 ACAT2Q9BWD1 397 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 GON7Q9BXV9 100 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF717Q9BY31 904 aaPredicted RBP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 TRIM31Q9BZY9 425 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 BOLA2Q9H3K6 86 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 TMEM9Q9P0T7 183 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 SENP1Q9P0U3 644 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 TBK1Q9UHD2 729 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 ADAMTS6Q9UKP5 1117 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 TNPO3Q9Y5L0 923 aaKnown RBP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 AP4B1Q9Y6B7 739 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 DOT1LQ8TEK3 1739 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF532Q9HCE3 1301 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 SMCO2A6NFE2 343 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 LRRC53A6NM62 1247 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 MEIS1O00470 390 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 VWA5AO00534 786 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 EXTL3O43909 919 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 TLR2O60603 784 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 DDX58O95786 925 aaKnown RBP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 RPN1P04843 607 aaKnown RBP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 ATP5BP06576 529 aaKnown RBP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 SRFP11831 508 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 FGFR4P22455 802 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 GRIK1P39086 918 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 BTDP43251 543 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 PHKA1P46020 1223 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 TOB1P50616 345 aaPredicted RBP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 PEX3P56589 373 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 TMPRSS15P98073 1019 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 NFKB2Q00653 900 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 POU4F1Q01851 419 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 ZBTB16Q05516 673 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 LONRF1Q17RB8 773 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 LRRC36Q1X8D7 754 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 DPY19L1Q2PZI1 675 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 FAM205BPQ63HN1 556 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 FCRLBQ6BAA4 426 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 STYK1Q6J9G0 422 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 TTC27Q6P3X3 843 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 OTOP3Q7RTS5 596 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 OTOAQ7RTW8 1153 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF354CQ86Y25 554 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC4A11Q8NBS3 891 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 DENND1AQ8TEH3 1009 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 KRT35Q92764 455 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 ZUFSPQ96AP4 578 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 INTS12Q96CB8 462 aaKnown RBP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 RMDN3Q96TC7 470 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 MXD3Q9BW11 206 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 GPR62Q9BZJ7 368 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 TMEM206Q9H813 350 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 TAS2R7Q9NYW3 318 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 HEY2Q9UBP5 337 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 VPS4AQ9UN37 437 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC8A2Q9UPR5 921 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 SIK3Q9Y2K2 1263 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 MRPL11Q9Y3B7 192 aaKnown RBP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 PSME4Q14997 1843 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 XDHP47989 1333 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 SPATA31A5Q5VU36 1347 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 SPATA31A7Q8IWB4 1347 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 MRC1P22897 1456 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 A0A1W2PRG0 241 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 A6NL46 340 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CCNT2O60583 730 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 IDH1O75874 414 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 TGDSO95455 350 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 H6PDO95479 791 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 POLR2MP0CAP2 368 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 GSTM2P28161 218 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 MAN1A1P33908 653 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 PSMC2P35998 433 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 KLK7P49862 253 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 POLR2GP62487 172 aaKnown RBP eCLIP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms