RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 PRAG1Q86YV5 1406 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 TULP4Q9NRJ4 1543 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 PHRF1Q9P1Y6 1649 aaKnown RBP4.97□□□□□ -1.61
CNOT4-209ENST00000473470 NRXN3Q9Y4C0 1643 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 DPPA5A6NC42 116 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 EFCAB8A8MWE9 144 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 M0QZQ0 153 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 PRPF4O43172 522 aaKnown RBP eCLIP4.97□□□□□ -1.61
CNOT4-209ENST00000473470 TLX3O43711 291 aaPredicted RBP4.97□□□□□ -1.61
CNOT4-209ENST00000473470 CER1O95813 267 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 CYP19A1P11511 503 aaPredicted RBP4.97□□□□□ -1.61
CNOT4-209ENST00000473470 SLC37A1P57057 533 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 SF3A3Q12874 501 aaKnown RBP eCLIP4.97□□□□□ -1.61
CNOT4-209ENST00000473470 MAPK7Q13164 816 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 MTX1Q13505 466 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 TBRG1Q3YBR2 411 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 RAB11FIP2Q7L804 512 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 TRAPPC11Q7Z392 1133 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 TECPR1Q7Z6L1 1165 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 PIM3Q86V86 326 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 PAQR4Q8N4S7 273 aaPredicted RBP4.97□□□□□ -1.61
CNOT4-209ENST00000473470 ZNF366Q8N895 744 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 THAP4Q8WY91 577 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 GPR78Q96P69 363 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 SFXN1Q9H9B4 322 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 MLXIPQ9HAP2 919 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 ITM2CQ9NQX7 267 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 DECR2Q9NUI1 292 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 HEY2Q9UBP5 337 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 GJD2Q9UKL4 321 aa4.97□□□□□ -1.61
CNOT4-209ENST00000473470 ARHGEF5Q12774 1597 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 TUBGCP6Q96RT7 1819 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 DNPH1O43598 174 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 KLRK1P26718 216 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 CDK7P50613 346 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 AP2B1P63010 937 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 HNRNPA0Q13151 305 aaKnown RBP4.96□□□□□ -1.62
CNOT4-209ENST00000473470 EFR3AQ14156 821 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 ZNF569Q5MCW4 686 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 FBXO47Q5MNV8 452 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 CYP26C1Q6V0L0 522 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 GLCCI1Q86VQ1 547 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 SUGP1Q8IWZ8 645 aaKnown RBP4.96□□□□□ -1.62
CNOT4-209ENST00000473470 DDIASQ8IXT1 998 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 SCAMP5Q8TAC9 235 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 WIPF2Q8TF74 440 aaPredicted RBP4.96□□□□□ -1.62
CNOT4-209ENST00000473470 NLRP4Q96MN2 994 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 FOXP1Q9H334 677 aaPredicted RBP4.96□□□□□ -1.62
CNOT4-209ENST00000473470 CCDC134Q9H6E4 229 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 RRP7BPQ9NSQ0 103 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 TMLHEQ9NVH6 421 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 B3GNT3Q9Y2A9 372 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.96□□□□□ -1.62
CNOT4-209ENST00000473470 LRRFIP2Q9Y608 721 aaKnown RBP4.96□□□□□ -1.62
CNOT4-209ENST00000473470 NEXMIFQ5QGS0 1516 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 TNS3Q68CZ2 1445 aa4.96□□□□□ -1.62
CNOT4-209ENST00000473470 RGPD8O14715 1765 aaPredicted RBP4.96□□□□□ -1.62
CNOT4-209ENST00000473470 COL14A1Q05707 1796 aaKnown RBP4.96□□□□□ -1.62
CNOT4-209ENST00000473470 PIK3R4Q99570 1358 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 CASP8AP2Q9UKL3 1982 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 CICQ96RK0 1608 aaPredicted RBP4.95□□□□□ -1.62
CNOT4-209ENST00000473470 EIF2AK4Q9P2K8 1649 aaKnown RBP4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TBC1D3DA0A087WVF3 549 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TBC1D3IA0A087WXS9 549 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TBC1D3EA0A087X179 549 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TBC1D3KA0A087X1G2 549 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TBC1D3BA6NDS4 549 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TBC1D3FA6NER0 549 aaPredicted RBP4.95□□□□□ -1.62
CNOT4-209ENST00000473470 SLC38A8A6NNN8 435 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TBC1D3LB9A6J9 549 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 NCAM2O15394 837 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 SYF2O95926 243 aaKnown RBP4.95□□□□□ -1.62
CNOT4-209ENST00000473470 CYP3A4P08684 503 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 RFPL3SP0C7P2 107 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TBC1D3HP0C7X1 549 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TBXAS1P24557 533 aaPredicted RBP4.95□□□□□ -1.62
CNOT4-209ENST00000473470 ADD2P35612 726 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 STAT1P42224 750 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 RNASELQ05823 741 aaKnown RBP4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TAF5Q15542 800 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TIGD6Q17RP2 521 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 ZNF260Q3ZCT1 412 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TTC22Q5TAA0 569 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TBC1D3GQ6DHY5 549 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TBC1D3CQ6IPX1 549 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 NFRKBQ6P4R8 1299 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 CYB5R4Q7L1T6 521 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 MOGAT3Q86VF5 341 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 ADGRF3Q8IZF5 1079 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TBC1D3Q8IZP1 549 aaPredicted RBP4.95□□□□□ -1.62
CNOT4-209ENST00000473470 MMP21Q8N119 569 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 HMGB4Q8WW32 186 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 IGFBPL1Q8WX77 278 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 CPT1BQ92523 772 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 SDCCAG3Q96C92 435 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 VCPIP1Q96JH7 1222 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TBATAQ96M53 351 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 PIMREGQ9BSJ6 248 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 TASP1Q9H6P5 420 aa4.95□□□□□ -1.62
CNOT4-209ENST00000473470 MLXIPLQ9NP71 852 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms