RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 ZCWPW1Q9H0M4 648 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 L2HGDHQ9H9P8 463 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 DMAP1Q9NPF5 467 aaPredicted RBP6.61□□□□□ -1.35
HDAC1-205ENST00000472928 TDP1Q9NUW8 608 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 TMEM30AQ9NV96 361 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 TMLHEQ9NVH6 421 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 ABI2Q9NYB9 513 aaPredicted RBP6.61□□□□□ -1.35
HDAC1-205ENST00000472928 OGFRQ9NZT2 677 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 WDR35Q9P2L0 1181 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 ZMYM5Q9UJ78 669 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 CDC23Q9UJX2 597 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 MMP17Q9ULZ9 603 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 SAR1BQ9Y6B6 198 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 WNT6Q9Y6F9 365 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 ATMQ13315 3056 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 CCDC66A2RUB6 948 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 SLC35F4A4IF30 521 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 EIF4E1BA6NMX2 242 aaKnown RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 MIF4GDA9UHW6 222 aaKnown RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 SGK1O00141 431 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 MYO1FO00160 1098 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 KCNK3O14649 394 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 ZNF185O15231 689 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 DDX3YO15523 660 aaKnown RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 PAPSS1O43252 624 aaPredicted RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 SH3BP5O60239 455 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 OPHN1O60890 802 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 GRAP2O75791 330 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 BEST1O76090 585 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 SLU7O95391 586 aaKnown RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 CFIP05156 583 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 SERPINF2P08697 491 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 FTH1P19P0C7X4 201 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 HAPLN1P10915 354 aaPredicted RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 KRT3P12035 628 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 LCP1P13796 627 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 BDNFP23560 247 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 PSMA2P25787 234 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 DDX6P26196 483 aaKnown RBP eCLIP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 CTNNA1P35221 906 aaKnown RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 RDXP35241 583 aaKnown RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 HOXD12P35452 270 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 OPRD1P41143 372 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 SSR1P43307 286 aaKnown RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 TUFMP49411 452 aaKnown RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 GPR15P49685 360 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 CACNA2D1P54289 1103 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 RPL7AP62424 266 aaKnown RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 CBX1P83916 185 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 OGDHQ02218 1023 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 PTSQ03393 145 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 MESP2Q0VG99 397 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 TUBB2AQ13885 445 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 UBAP2LQ14157 1087 aaKnown RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 TRIP6Q15654 476 aaKnown RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 MGAT5BQ3V5L5 792 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 C2orf27AQ580R0 203 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 SPDYCQ5MJ68 293 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 CCDC181Q5TID7 509 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 CC2D1AQ6P1N0 951 aaPredicted RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 FAM171BQ6P995 826 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 FIGNL1Q6PIW4 674 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 OLFML1Q6UWY5 402 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 PAQR9Q6ZVX9 377 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 GPRIN1Q7Z2K8 1008 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 SLCO6A1Q86UG4 719 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 PIGZQ86VD9 579 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 DCP1BQ8IZD4 617 aaKnown RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 HDDC3Q8N4P3 179 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 EMC1Q8N766 993 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 UBL4BQ8N7F7 174 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 LRRN4CLQ8ND94 238 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 JOSD2Q8TAC2 188 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 CLEC4CQ8WTT0 213 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 COG1Q8WTW3 980 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 SLC35F5Q8WV83 523 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 KRT35Q92764 455 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 EXOC4Q96A65 974 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 HES6Q96HZ4 224 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 SLC22A12Q96S37 553 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 SMOQ99835 787 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 TUBB2BQ9BVA1 445 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 CARD6Q9BX69 1037 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 LINC00597Q9H2U6 94 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 LRRC4Q9HBW1 653 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 ABCB6Q9NP58 842 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 DUS2Q9NX74 493 aaKnown RBP6.6□□□□□ -1.35
HDAC1-205ENST00000472928 SMARCAL1Q9NZC9 954 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 EHD2Q9NZN4 543 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 DKK4Q9UBT3 224 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 IP6K2Q9UHH9 426 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 LCMT1Q9UIC8 334 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 SLC6A14Q9UN76 642 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 ALG6Q9Y672 507 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 AK5Q9Y6K8 562 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 LRRK2Q5S007 2527 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 PTPRBP23467 1997 aa6.6□□□□□ -1.35
HDAC1-205ENST00000472928 MYOFQ9NZM1 2061 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 TMEM191CA6NGB0 347 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms