RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ALG14Q96F25 216 aa19.51■□□□□ 0.71
SORT1-203ENST00000471996 BTN2A3PQ96KV6 586 aa19.51■□□□□ 0.71
SORT1-203ENST00000471996 PPP1R9BQ96SB3 815 aa19.51■□□□□ 0.71
SORT1-203ENST00000471996 MIS12Q9H081 205 aa19.51■□□□□ 0.71
SORT1-203ENST00000471996 DOCK9Q9BZ29 2069 aa19.51■□□□□ 0.71
SORT1-203ENST00000471996 SPTY2D1-AS1A0A0U1RR47 76 aa19.5■□□□□ 0.71
SORT1-203ENST00000471996 AQP9O43315 295 aa19.5■□□□□ 0.71
SORT1-203ENST00000471996 NOBOXO60393 691 aa19.5■□□□□ 0.71
SORT1-203ENST00000471996 CTSLP07711 333 aa19.5■□□□□ 0.71
SORT1-203ENST00000471996 ME1P48163 572 aa19.5■□□□□ 0.71
SORT1-203ENST00000471996 PDX1P52945 283 aa19.5■□□□□ 0.71
SORT1-203ENST00000471996 CNGA2Q16280 664 aa19.5■□□□□ 0.71
SORT1-203ENST00000471996 DEFB133Q30KQ1 61 aa19.5■□□□□ 0.71
SORT1-203ENST00000471996 ZC3H12AQ5D1E8 599 aaKnown RBP19.5■□□□□ 0.71
SORT1-203ENST00000471996 SEL1L3Q68CR1 1132 aa19.5■□□□□ 0.71
SORT1-203ENST00000471996 PARGQ86W56 976 aa19.5■□□□□ 0.71
SORT1-203ENST00000471996 INTS4Q96HW7 963 aaKnown RBP19.5■□□□□ 0.71
SORT1-203ENST00000471996 FEM1AQ9BSK4 669 aa19.5■□□□□ 0.71
SORT1-203ENST00000471996 KLF15Q9UIH9 416 aa19.5■□□□□ 0.71
SORT1-203ENST00000471996 MAPK8IP1Q9UQF2 711 aa19.5■□□□□ 0.71
SORT1-203ENST00000471996 COQ4Q9Y3A0 265 aa19.5■□□□□ 0.71
SORT1-203ENST00000471996 PCDHGA7Q9Y5G6 932 aa19.5■□□□□ 0.71
SORT1-203ENST00000471996 TCAF2A6NFQ2 919 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 KPNA3O00505 521 aaPredicted RBP19.49■□□□□ 0.71
SORT1-203ENST00000471996 TPP1O14773 563 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 CASC3O15234 703 aaKnown RBP19.49■□□□□ 0.71
SORT1-203ENST00000471996 BNIP3LO60238 219 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 PCDH8O95206 1070 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 MYL1P05976 194 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 PAEPP09466 180 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 FAM87AP0C7U9 286 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 SLC5A2P31639 672 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 UBAP2LQ14157 1087 aaKnown RBP19.49■□□□□ 0.71
SORT1-203ENST00000471996 CBWD6Q4V339 395 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 TMEM259Q4ZIN3 620 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 CBWD3Q5JTY5 395 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 CBWD5Q5RIA9 395 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 TTC39BQ5VTQ0 682 aaPredicted RBP19.49■□□□□ 0.71
SORT1-203ENST00000471996 SYPL2Q5VXT5 272 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 KYAT3Q6YP21 454 aaKnown RBP19.49■□□□□ 0.71
SORT1-203ENST00000471996 BEND5Q7L4P6 421 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 SH2D3CQ8N5H7 860 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 FAM149B1Q96BN6 582 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 LIN37Q96GY3 246 aaPredicted RBP19.49■□□□□ 0.71
SORT1-203ENST00000471996 PRMT1Q99873 361 aaKnown RBP19.49■□□□□ 0.71
SORT1-203ENST00000471996 ZSWIM1Q9BR11 485 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 SEPT3Q9UH03 358 aa19.49■□□□□ 0.71
SORT1-203ENST00000471996 FARP1Q9Y4F1 1045 aaPredicted RBP19.49■□□□□ 0.71
SORT1-203ENST00000471996 POM121BA6NF01 834 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 M0QYV0 167 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 MUSKO15146 869 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 GP1BBP13224 206 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 CHRNA3P32297 505 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 DRAP1Q14919 205 aaPredicted RBP19.48■□□□□ 0.71
SORT1-203ENST00000471996 TGIF1Q15583 401 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 RABGAP1LQ5R372 815 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 C14orf80Q86SX3 495 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 ATP6V0D2Q8N8Y2 350 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 TMIEQ8NEW7 156 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 RNF34Q969K3 372 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 IL12RB2Q99665 862 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 BOCQ9BWV1 1114 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 DYRK4Q9NR20 520 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 ACSL6Q9UKU0 697 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 OR51B4Q9Y5P0 310 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 TDRD6O60522 2096 aaKnown RBP19.48■□□□□ 0.71
SORT1-203ENST00000471996 DOPEY2Q9Y3R5 2298 aa19.48■□□□□ 0.71
SORT1-203ENST00000471996 KCNU1A8MYU2 1149 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 PLD2O14939 933 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 SART1O43290 800 aaKnown RBP19.47■□□□□ 0.71
SORT1-203ENST00000471996 RHOBTB3O94955 611 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 RPIAP49247 311 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 TLE1Q04724 770 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 SRSF6Q13247 344 aaKnown RBP19.47■□□□□ 0.71
SORT1-203ENST00000471996 SPIDRQ14159 915 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 STILQ15468 1287 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 ZCWPW2Q504Y3 356 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 TMEM270Q6UE05 265 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 ERN2Q76MJ5 926 aaKnown RBP19.47■□□□□ 0.71
SORT1-203ENST00000471996 GUF1Q8N442 669 aaKnown RBP19.47■□□□□ 0.71
SORT1-203ENST00000471996 OR52K2Q8NGK3 314 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 LMX1AQ8TE12 382 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 GLMNQ92990 594 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 NAT6Q93015 286 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 CCDC3Q9BQI4 270 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 SLC17A9Q9BYT1 436 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 SLC12A6Q9UHW9 1150 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 AHCTF1Q8WYP5 2266 aa19.47■□□□□ 0.71
SORT1-203ENST00000471996 PAK4O96013 591 aaPredicted RBP19.46■□□□□ 0.71
SORT1-203ENST00000471996 IGLV3-25P01717 112 aa19.46■□□□□ 0.71
SORT1-203ENST00000471996 EPB41P11171 864 aaKnown RBP19.46■□□□□ 0.71
SORT1-203ENST00000471996 JUNDP17535 347 aa19.46■□□□□ 0.71
SORT1-203ENST00000471996 TBXAS1P24557 533 aaPredicted RBP19.46■□□□□ 0.71
SORT1-203ENST00000471996 RABIFP47224 123 aa19.46■□□□□ 0.71
SORT1-203ENST00000471996 RPL34P49207 117 aaKnown RBP19.46■□□□□ 0.71
SORT1-203ENST00000471996 EIF3IQ13347 325 aaKnown RBP19.46■□□□□ 0.71
SORT1-203ENST00000471996 FGL2Q14314 439 aa19.46■□□□□ 0.71
SORT1-203ENST00000471996 SLC35F3Q8IY50 421 aa19.46■□□□□ 0.71
SORT1-203ENST00000471996 FBXO39Q8N4B4 442 aa19.46■□□□□ 0.71
SORT1-203ENST00000471996 OR2A12Q8NGT7 310 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms