RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 HEXIM1O94992 359 aaKnown RBP5.04□□□□□ -1.6
CD46-213ENST00000471987 GSTM2P28161 218 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 TYK2P29597 1187 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 AMTP48728 403 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 CLCN5P51795 746 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 NUDT6P53370 316 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 COASYQ13057 564 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 PKP1Q13835 747 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 PTK2BQ14289 1009 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 MTFR2Q6P444 385 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 GSG1LQ6UXU4 331 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 H1FNTQ75WM6 255 aaPredicted RBP5.04□□□□□ -1.6
CD46-213ENST00000471987 ARMC9Q7Z3E5 817 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 PALB2Q86YC2 1186 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 FAM186BQ8IYM0 893 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 ZDHHC23Q8IYP9 409 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 TMEM163Q8TC26 289 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 WFIKKN2Q8TEU8 576 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 GFM1Q96RP9 751 aaKnown RBP5.04□□□□□ -1.6
CD46-213ENST00000471987 PIGSQ96S52 555 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 RTKNQ9BST9 563 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 BRD8Q9H0E9 1235 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 ARFGAP3Q9NP61 516 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 C17orf102A2RUQ5 167 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 FFAR2O15552 330 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 SOX30O94993 753 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 TNFRSF6BO95407 300 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 ITGA2BP08514 1039 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 ENO3P13929 434 aaPredicted RBP5.03□□□□□ -1.6
CD46-213ENST00000471987 PPM1AP35813 382 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 NEK3P51956 506 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 CDH12P55289 794 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 POU3F1Q03052 451 aaPredicted RBP5.03□□□□□ -1.6
CD46-213ENST00000471987 ZNF284Q2VY69 593 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.03□□□□□ -1.68e-14■■■□□ 14.8
CD46-213ENST00000471987 RAB11FIP2Q7L804 512 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 VPS52Q8N1B4 723 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 HDAC7Q8WUI4 952 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 FAR1Q8WVX9 515 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 EID2BQ96D98 161 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 DUX5Q96PT3 197 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 IFT27Q9BW83 186 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 C1QTNF4Q9BXJ3 329 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 PCGF6Q9BYE7 350 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.03□□□□□ -1.6
CD46-213ENST00000471987 SLC22A11Q9NSA0 550 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 CDH22Q9UJ99 828 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 BAG5Q9UL15 447 aa5.03□□□□□ -1.6
CD46-213ENST00000471987 SLC16A5O15375 505 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 RNMTO43148 476 aaKnown RBP5.02□□□□□ -1.61
CD46-213ENST00000471987 KCNJ13O60928 360 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 MYL1P05976 194 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 FCGR2AP12318 317 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 NAGAP17050 411 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 CLCNKBP51801 687 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 GXYLT1Q4G148 440 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 OR1N1Q8NGS0 311 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 CPT1BQ92523 772 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 KCNJ9Q92806 393 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 KATNAL1Q9BW62 490 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 OBP2BQ9NPH6 170 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 SEL1LQ9UBV2 794 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 KCNG2Q9UJ96 466 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 CDC23Q9UJX2 597 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 DAPP1Q9UN19 280 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 C19orf53Q9UNZ5 99 aaPredicted RBP5.02□□□□□ -1.61
CD46-213ENST00000471987 MST1RQ04912 1400 aa5.02□□□□□ -1.61
CD46-213ENST00000471987 A0A087WYN8 130 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 PLSCR5A0PG75 271 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 NPIPB13A6NJU9 1138 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 NPIPB5A8MRT5 1133 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 NPIPB4C9JG80 1138 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 HSPB6O14558 160 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 LINC01565O15544 149 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 HNRNPRO43390 633 aaKnown RBP5.01□□□□□ -1.61
CD46-213ENST00000471987 CCNT1O60563 726 aaKnown RBP5.01□□□□□ -1.61
CD46-213ENST00000471987 MMP3P08254 477 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 GYS1P13807 737 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 ZNF12P17014 697 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 THPOP40225 353 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 EEF1A2Q05639 463 aaKnown RBP5.01□□□□□ -1.61
CD46-213ENST00000471987 RPS6KA2Q15349 733 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 KIF19Q2TAC6 998 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 SYTL3Q4VX76 610 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 TMEM268Q5VZI3 342 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 MON1BQ7L1V2 547 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 RNF144BQ7Z419 303 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 ZNF329Q86UD4 541 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 TCP11L2Q8N4U5 519 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 ZNF527Q8NB42 609 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 TMED6Q8WW62 240 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 ARRDC3Q96B67 414 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 CADM1Q9BY67 442 aaKnown RBP5.01□□□□□ -1.61
CD46-213ENST00000471987 ELAC1Q9H777 363 aaKnown RBP5.01□□□□□ -1.61
CD46-213ENST00000471987 ARNT2Q9HBZ2 717 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 NLRC4Q9NPP4 1024 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 HERC5Q9UII4 1024 aaKnown RBP5.01□□□□□ -1.61
CD46-213ENST00000471987 OSGIN2Q9Y236 505 aa5.01□□□□□ -1.61
CD46-213ENST00000471987 LOC102724159A0A0B4J2E5 919 aa5□□□□□ -1.61
CD46-213ENST00000471987 SRRM3A6NNA2 597 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms