RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 TP53BP1Q12888 1972 aaPredicted RBP23.09■■□□□ 1.29
C9orf3-213ENST00000471978 RRM1P23921 792 aa23.08■■□□□ 1.29
C9orf3-213ENST00000471978 NUDT1P36639 197 aa23.08■■□□□ 1.29
C9orf3-213ENST00000471978 ANP32AP39687 249 aaKnown RBP23.08■■□□□ 1.29
C9orf3-213ENST00000471978 NXPH1P58417 271 aa23.08■■□□□ 1.29
C9orf3-213ENST00000471978 CDR2Q01850 454 aa23.08■■□□□ 1.29
C9orf3-213ENST00000471978 SHBQ15464 509 aa23.08■■□□□ 1.29
C9orf3-213ENST00000471978 FKBP15Q5T1M5 1219 aa23.08■■□□□ 1.29
C9orf3-213ENST00000471978 LINGO4Q6UY18 593 aa23.08■■□□□ 1.29
C9orf3-213ENST00000471978 TMPRSS7Q7RTY8 843 aa23.08■■□□□ 1.29
C9orf3-213ENST00000471978 TRIM69Q86WT6 500 aa23.08■■□□□ 1.29
C9orf3-213ENST00000471978 DCAF4L2Q8NA75 395 aa23.08■■□□□ 1.29
C9orf3-213ENST00000471978 OR2A12Q8NGT7 310 aa23.08■■□□□ 1.29
C9orf3-213ENST00000471978 RALYQ9UKM9 306 aaKnown RBP23.08■■□□□ 1.29
C9orf3-213ENST00000471978 DMTF1Q9Y222 760 aa23.08■■□□□ 1.29
C9orf3-213ENST00000471978 LAMA5O15230 3695 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 FAM208BQ5VWN6 2430 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 SMAD6O43541 496 aaKnown RBP23.07■■□□□ 1.28
C9orf3-213ENST00000471978 CAPNS1P04632 268 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 ITGAVP06756 1048 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 CTSLP07711 333 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 CHRNA3P32297 505 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 ARRB1P49407 418 aaPredicted RBP23.07■■□□□ 1.28
C9orf3-213ENST00000471978 CLCN6P51797 869 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 ATP11AP98196 1134 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 CCDC157Q569K6 752 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 ARTNQ5T4W7 220 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 EMC1Q8N766 993 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 MFSD2AQ8NA29 543 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 OR7D4Q8NG98 312 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 SAP25Q8TEE9 199 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 SPON2Q9BUD6 331 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 ZYG11BQ9C0D3 744 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 NLRC4Q9NPP4 1024 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 FANCLQ9NW38 375 aa23.07■■□□□ 1.28
C9orf3-213ENST00000471978 ITPR1Q14643 2758 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 NBEAQ8NFP9 2946 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 ZFYVE26Q68DK2 2539 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 ILVBLA1L0T0 632 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 KPNA3O00505 521 aaPredicted RBP23.06■■□□□ 1.28
C9orf3-213ENST00000471978 YKT6O15498 198 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 ENDOD1O94919 500 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 CYP1A1P04798 512 aaPredicted RBP23.06■■□□□ 1.28
C9orf3-213ENST00000471978 CHRNB2P17787 502 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 MMP8P22894 467 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 GLDCP23378 1020 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 SOX5P35711 763 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 JAM2P57087 298 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 TAS2R38P59533 333 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 FMO1Q01740 532 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 PIP5KL1Q5T9C9 394 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 PHLDB2Q86SQ0 1253 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 TMIEQ8NEW7 156 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 ERVMER34-1Q9H9K5 563 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 PREBQ9HCU5 417 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 ZNF212Q9UDV6 495 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 PLXNB3Q9ULL4 1909 aa23.06■■□□□ 1.28
C9orf3-213ENST00000471978 PTPRBP23467 1997 aa23.05■■□□□ 1.28
C9orf3-213ENST00000471978 CBX4O00257 560 aa23.05■■□□□ 1.28
C9orf3-213ENST00000471978 TAF4O00268 1085 aa23.05■■□□□ 1.28
C9orf3-213ENST00000471978 EPHB6O15197 1021 aa23.05■■□□□ 1.28
C9orf3-213ENST00000471978 CCDC15Q0P6D6 951 aa23.05■■□□□ 1.28
C9orf3-213ENST00000471978 STAT4Q14765 748 aa23.05■■□□□ 1.28
C9orf3-213ENST00000471978 SETMARQ53H47 684 aaPredicted RBP23.05■■□□□ 1.28
C9orf3-213ENST00000471978 C22orf39Q6P5X5 142 aa23.05■■□□□ 1.28
C9orf3-213ENST00000471978 ZNF783Q6ZMS7 281 aa23.05■■□□□ 1.28
C9orf3-213ENST00000471978 RBM43Q6ZSC3 357 aaKnown RBP23.05■■□□□ 1.28
C9orf3-213ENST00000471978 PROSER1Q86XN7 944 aa23.05■■□□□ 1.28
C9orf3-213ENST00000471978 GALNT15Q8N3T1 639 aa23.05■■□□□ 1.28
C9orf3-213ENST00000471978 CHST14Q8NCH0 376 aa23.05■■□□□ 1.28
C9orf3-213ENST00000471978 SLC30A5Q8TAD4 765 aa23.05■■□□□ 1.28
C9orf3-213ENST00000471978 GPT2Q8TD30 523 aa23.05■■□□□ 1.28
C9orf3-213ENST00000471978 TNKS2Q9H2K2 1166 aa23.05■■□□□ 1.28
C9orf3-213ENST00000471978 DYRK4Q9NR20 520 aa23.05■■□□□ 1.28
C9orf3-213ENST00000471978 MAGEC1O60732 1142 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 RNGTTO60942 597 aaKnown RBP23.04■■□□□ 1.28
C9orf3-213ENST00000471978 PRNPP04156 253 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 EPHA8P29322 1005 aaPredicted RBP23.04■■□□□ 1.28
C9orf3-213ENST00000471978 SDC4P31431 198 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 STAT1P42224 750 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 RECQLP46063 649 aaPredicted RBP23.04■■□□□ 1.28
C9orf3-213ENST00000471978 CDO1Q16878 200 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 C15orf59Q2T9L4 293 aaPredicted RBP23.04■■□□□ 1.28
C9orf3-213ENST00000471978 CCDC14Q49A88 953 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 RAB6CQ53S08 254 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 RETSATQ6NUM9 610 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 IQCHQ86VS3 1027 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 SPATS2Q86XZ4 545 aaKnown RBP23.04■■□□□ 1.28
C9orf3-213ENST00000471978 OXR1Q8N573 874 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 RXFP2Q8WXD0 754 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 ARRDC3Q96B67 414 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 C11orf70Q9BRQ4 267 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 RAB6CQ9H0N0 254 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 CCDC86Q9H6F5 360 aaKnown RBP23.04■■□□□ 1.28
C9orf3-213ENST00000471978 ATP13A1Q9HD20 1204 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 PPARGC1AQ9UBK2 798 aaKnown RBP23.04■■□□□ 1.28
C9orf3-213ENST00000471978 IL36AQ9UHA7 158 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 SIK3Q9Y2K2 1263 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 DAAM1Q9Y4D1 1078 aa23.04■■□□□ 1.28
C9orf3-213ENST00000471978 PRAMEF26H0Y7S4 382 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms