RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 VAT1Q99536 393 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 CREBZFQ9NS37 354 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 ARMCX1Q9P291 453 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 PSAT1Q9Y617 370 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 RPS6KL1Q9Y6S9 549 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 WASF2Q9Y6W5 498 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 PATJQ8NI35 1801 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 POLBP06746 335 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 GSTA3Q16772 222 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 MANEALQ5VSG8 457 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 FOXB2Q5VYV0 432 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 PACS1Q6VY07 963 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 ARHGAP12Q8IWW6 846 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 CDKL2Q92772 493 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 CFHR5Q9BXR6 569 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 CASS4Q9NQ75 786 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 PDP2Q9P2J9 529 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 ARHGAP42A6NI28 874 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 TADA2AO75478 443 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 CNTFP26441 200 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 HOXC13P31276 330 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 GRK4P32298 578 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 VARS2Q5ST30 1063 aaKnown RBP17.7■□□□□ 0.42
RRP1-202ENST00000471909 FAM91A1Q658Y4 838 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 ITPRIPL1Q6GPH6 555 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 EGFL6Q8IUX8 553 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 CNTD1Q8N815 330 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 GBP5Q96PP8 586 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 FAM193BQ96PV7 902 aaPredicted RBP17.7■□□□□ 0.42
RRP1-202ENST00000471909 MECRQ9BV79 373 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 NMUR2Q9GZQ4 415 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 TMEM161AQ9NX61 479 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 VANGL2Q9ULK5 521 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 MRPL42Q9Y6G3 142 aaKnown RBP17.7■□□□□ 0.42
RRP1-202ENST00000471909 NUP205Q92621 2012 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 ERI2A8K979 691 aaKnown RBP17.7■□□□□ 0.42
RRP1-202ENST00000471909 ARVCFO00192 962 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 DFFAO00273 331 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 RTN3O95197 1032 aaPredicted RBP17.7■□□□□ 0.42
RRP1-202ENST00000471909 TOP3BO95985 862 aaKnown RBP17.7■□□□□ 0.42
RRP1-202ENST00000471909 ERVK-10P10266 1014 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 CPA2P48052 419 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 RAP1GDS1P52306 607 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 GPNMBQ14956 572 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 LRRC8DQ7L1W4 858 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 KBTBD2Q8IY47 623 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 DNAAF3Q8N9W5 541 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 FTHL17Q9BXU8 183 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 HMX1Q9NP08 348 aaPredicted RBP17.7■□□□□ 0.42
RRP1-202ENST00000471909 UBP1Q9NZI7 540 aa17.7■□□□□ 0.42
RRP1-202ENST00000471909 B2RBV5 119 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 MAGEC1O60732 1142 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 IL1BP01584 269 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 ALDOAP04075 364 aaKnown RBP17.69■□□□□ 0.42
RRP1-202ENST00000471909 CRHR1P34998 444 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 PPP2R5DQ14738 602 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 SPANXN3Q5MJ09 141 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 REM2Q8IYK8 340 aaPredicted RBP17.69■□□□□ 0.42
RRP1-202ENST00000471909 CERS2Q96G23 380 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 FUBP3Q96I24 572 aaKnown RBP eCLIP17.69■□□□□ 0.42
RRP1-202ENST00000471909 APOL2Q9BQE5 337 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 FAM192AQ9GZU8 254 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 LRRC40Q9H9A6 602 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 NDFIP2Q9NV92 336 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 BFARQ9NZS9 450 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 SCML2Q9UQR0 700 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 TTC3P53804 2025 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 FAM237BA0A1B0GVD1 139 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 KCNU1A8MYU2 1149 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 F8W8V4 182 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 NBNO60934 754 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 SELPP16109 830 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 USP46P62068 366 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 ZNF33AQ06730 810 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 NAB1Q13506 487 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 NFE2Q16621 373 aaPredicted RBP17.69■□□□□ 0.42
RRP1-202ENST00000471909 CERCAMQ5T4B2 595 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 C6orf163Q5TEZ5 329 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 OTOP3Q7RTS5 596 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 TMEM135Q86UB9 458 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 ALYREFQ86V81 257 aaKnown RBP17.69■□□□□ 0.42
RRP1-202ENST00000471909 TMPRSS6Q8IU80 811 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 NUP93Q8N1F7 819 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 TTC9BQ8N6N2 239 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 USP33Q8TEY7 942 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 ZNF419Q96HQ0 510 aaPredicted RBP17.69■□□□□ 0.42
RRP1-202ENST00000471909 B3GALT6Q96L58 329 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 C8orf48Q96LL4 319 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 TSGA13Q96PP4 275 aa17.69■□□□□ 0.42
RRP1-202ENST00000471909 NR1H4Q96RI1 486 aaPredicted RBP17.69■□□□□ 0.42
RRP1-202ENST00000471909 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.69■□□□□ 0.42
RRP1-202ENST00000471909 CIB2O75838 187 aa17.68■□□□□ 0.42
RRP1-202ENST00000471909 MOCS2O96007 188 aaPredicted RBP17.68■□□□□ 0.42
RRP1-202ENST00000471909 UBTFL6P0CB48 400 aaPredicted RBP17.68■□□□□ 0.42
RRP1-202ENST00000471909 COG7P83436 770 aa17.68■□□□□ 0.42
RRP1-202ENST00000471909 MON1AQ86VX9 555 aa17.68■□□□□ 0.42
RRP1-202ENST00000471909 RASSF3Q86WH2 238 aa17.68■□□□□ 0.42
RRP1-202ENST00000471909 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.68■□□□□ 0.42
RRP1-202ENST00000471909 ATAD1Q8NBU5 361 aa17.68■□□□□ 0.42
RRP1-202ENST00000471909 HS3ST4Q9Y661 456 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms