RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 LNPEPQ9UIQ6 1025 aa6.55□□□□□ -1.36
SPEN-204ENST00000471538 ADAM28Q9UKQ2 775 aa6.55□□□□□ -1.36
SPEN-204ENST00000471538 VANGL2Q9ULK5 521 aa6.55□□□□□ -1.36
SPEN-204ENST00000471538 MTO1Q9Y2Z2 717 aaKnown RBP6.55□□□□□ -1.36
SPEN-204ENST00000471538 VWA8A3KMH1 1905 aa6.55□□□□□ -1.36
SPEN-204ENST00000471538 CHD9Q3L8U1 2897 aa6.55□□□□□ -1.36
SPEN-204ENST00000471538 MYO18AQ92614 2054 aaKnown RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 FAM237BA0A1B0GVD1 139 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 FAM92AA1XBS5 289 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 MOXD2PA6NHM9 499 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 CHUKO15111 745 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 FGF10O15520 208 aaPredicted RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 PLIN3O60664 434 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 MAFKO60675 156 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 GLRA3O75311 464 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 USP12O75317 370 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 PAGE1O75459 146 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 ADH1BP00325 375 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 POLBP06746 335 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 OR4Q2P0C623 313 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 ERVK-10P10266 1014 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 FGF3P11487 239 aaPredicted RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 CCNCP24863 283 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 TARSP26639 723 aaKnown RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 GP5P40197 560 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 NPY2RP49146 381 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 ARFIP2P53365 341 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 LIMK2P53671 638 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 COG7P83436 770 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 YWHAHQ04917 246 aaPredicted RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 MRPL58Q14197 206 aaKnown RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 KRT72Q14CN4 511 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 PCLAFQ15004 111 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 INSCQ1MX18 579 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 ANKRD20A4Q4UJ75 823 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 TAF1BQ53T94 588 aaPredicted RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 NOMO2Q5JPE7 1267 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 TEDDM1Q5T9Z0 273 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 GRTP1Q5TC63 336 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 MBLAC2Q68D91 279 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 CASC4Q6P4E1 433 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 CES3Q6UWW8 571 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 ARHGAP36Q6ZRI8 547 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 SLC24A5Q71RS6 500 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 RNF180Q86T96 592 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 MTDHQ86UE4 582 aaKnown RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 RASSF3Q86WH2 238 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 SPATA2LQ8IUW3 424 aaPredicted RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 CCDC117Q8IWD4 279 aaPredicted RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.54□□□□□ -1.36
SPEN-204ENST00000471538 OR6Y1Q8NGX8 325 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 E2F7Q96AV8 911 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 ZNF669Q96BR6 464 aaPredicted RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 TBC1D31Q96DN5 1066 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 PTCD3Q96EY7 689 aaKnown RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 SLC39A13Q96H72 371 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 FUBP3Q96I24 572 aaKnown RBP eCLIP6.54□□□□□ -1.36
SPEN-204ENST00000471538 CELF6Q96J87 481 aaKnown RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 C8orf48Q96LL4 319 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 AGAP3Q96P47 875 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 FCRL5Q96RD9 977 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 RBBP8Q99708 897 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 CPNE1Q99829 537 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 TSEN34Q9BSV6 310 aaKnown RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 TMEM120AQ9BXJ8 343 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 SLC13A1Q9BZW2 595 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 UBE2OQ9C0C9 1292 aaKnown RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 C20orf27Q9GZN8 174 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 IQCGQ9H095 443 aaKnown RBP6.54□□□□□ -1.36
SPEN-204ENST00000471538 CD248Q9HCU0 757 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 IL37Q9NZH6 218 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 IL1RAPL1Q9NZN1 696 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 SFMBT1Q9UHJ3 866 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 ZFP69BQ9UJL9 534 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 HAO1Q9UJM8 370 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 DCTN4Q9UJW0 460 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 SOX13Q9UN79 622 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 SCML2Q9UQR0 700 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 RPS6KL1Q9Y6S9 549 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 SHROOM3Q8TF72 1996 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 MYLKQ15746 1914 aa6.54□□□□□ -1.36
SPEN-204ENST00000471538 REV3LO60673 3130 aa6.53□□□□□ -1.36
SPEN-204ENST00000471538 A0A1W2PQH9 124 aa6.53□□□□□ -1.36
SPEN-204ENST00000471538 MAGEB16A2A368 324 aa6.53□□□□□ -1.36
SPEN-204ENST00000471538 ARHGAP42A6NI28 874 aa6.53□□□□□ -1.36
SPEN-204ENST00000471538 A8MUI8 341 aa6.53□□□□□ -1.36
SPEN-204ENST00000471538 HGSO14964 777 aaPredicted RBP6.53□□□□□ -1.36
SPEN-204ENST00000471538 MATN3O15232 486 aa6.53□□□□□ -1.36
SPEN-204ENST00000471538 PSMD3O43242 534 aa6.53□□□□□ -1.36
SPEN-204ENST00000471538 MSI1O43347 362 aaKnown RBP6.53□□□□□ -1.36
SPEN-204ENST00000471538 HNRNPCL1O60812 293 aaKnown RBP6.53□□□□□ -1.36
SPEN-204ENST00000471538 CBX6O95503 412 aa6.53□□□□□ -1.36
SPEN-204ENST00000471538 PEX11BO96011 259 aa6.53□□□□□ -1.36
SPEN-204ENST00000471538 JCHAINP01591 159 aa6.53□□□□□ -1.36
SPEN-204ENST00000471538 PROCP04070 461 aa6.53□□□□□ -1.36
SPEN-204ENST00000471538 SERPINB3P29508 390 aa6.53□□□□□ -1.36
SPEN-204ENST00000471538 CCR1P32246 355 aa6.53□□□□□ -1.36
SPEN-204ENST00000471538 ADRA1AP35348 466 aa6.53□□□□□ -1.36
SPEN-204ENST00000471538 GRIK1P39086 918 aa6.53□□□□□ -1.36
SPEN-204ENST00000471538 MAGEA11P43364 429 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms