RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 BACH2Q9BYV9 841 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 CPEB1Q9BZB8 566 aaKnown RBP7.06□□□□□ -1.28
HDAC1-204ENST00000471488 UBXN6Q9BZV1 441 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 MUC3BQ9H195 1237 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 TNKS2Q9H2K2 1166 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 CUEDC2Q9H467 287 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 ST7Q9NRC1 585 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 APOBEC3BQ9UH17 382 aaKnown RBP7.06□□□□□ -1.28
HDAC1-204ENST00000471488 VPS28Q9UK41 221 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 PADI4Q9UM07 663 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 LOXL2Q9Y4K0 774 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 ARID1BQ8NFD5 2236 aaPredicted RBP7.06□□□□□ -1.28
HDAC1-204ENST00000471488 ZFC3H1O60293 1989 aaKnown RBP7.06□□□□□ -1.28
HDAC1-204ENST00000471488 NYNRINQ9P2P1 1898 aaKnown RBP7.05□□□□□ -1.28
HDAC1-204ENST00000471488 A1L4Q6 167 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 FPGTO14772 594 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 CALCAP01258 141 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 NME1P15531 152 aaKnown RBP7.05□□□□□ -1.28
HDAC1-204ENST00000471488 PDCP20941 246 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 CHRNA3P32297 505 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 GGCXP38435 758 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 RECQLP46063 649 aaPredicted RBP7.05□□□□□ -1.28
HDAC1-204ENST00000471488 MXI1P50539 228 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 CCL7P80098 99 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 SKOR1P84550 965 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 CENPCQ03188 943 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 STK4Q13043 487 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 KCNAB2Q13303 367 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 E2F4Q16254 413 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 KIF26BQ2KJY2 2108 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 ZC3H12AQ5D1E8 599 aaKnown RBP7.05□□□□□ -1.28
HDAC1-204ENST00000471488 ARSIQ5FYB1 569 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 DCAF17Q5H9S7 520 aaPredicted RBP7.05□□□□□ -1.28
HDAC1-204ENST00000471488 RABGAP1LQ5R372 815 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 C1orf220Q5T0J3 134 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 PHF19Q5T6S3 580 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 PIP5KL1Q5T9C9 394 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 KRT39Q6A163 491 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 BORAQ6PGQ7 559 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 IGF2-ASQ6U949 168 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 INTS8Q75QN2 995 aaKnown RBP7.05□□□□□ -1.28
HDAC1-204ENST00000471488 SLC35F3Q8IY50 421 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 CCAR2Q8N163 923 aaKnown RBP7.05□□□□□ -1.28
HDAC1-204ENST00000471488 RYBPQ8N488 228 aaPredicted RBP7.05□□□□□ -1.28
HDAC1-204ENST00000471488 DQX1Q8TE96 717 aaKnown RBP7.05□□□□□ -1.28
HDAC1-204ENST00000471488 FRS2Q8WU20 508 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 HTR3CQ8WXA8 447 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 SEMA4DQ92854 862 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 ERCC4Q92889 916 aaPredicted RBP7.05□□□□□ -1.28
HDAC1-204ENST00000471488 USP7Q93009 1102 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 NAT6Q93015 286 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 CCDC74AQ96AQ1 378 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 EEF2KMTQ96G04 330 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 FCRL2Q96LA5 508 aaPredicted RBP7.05□□□□□ -1.28
HDAC1-204ENST00000471488 SERPINB11Q96P15 392 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 RPRD1AQ96P16 312 aaPredicted RBP7.05□□□□□ -1.28
HDAC1-204ENST00000471488 SLC17A9Q9BYT1 436 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 SLC13A1Q9BZW2 595 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 TCEAL2Q9H3H9 227 aaPredicted RBP7.05□□□□□ -1.28
HDAC1-204ENST00000471488 TMEM8AQ9HCN3 771 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 CNGB3Q9NQW8 809 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 SPASTQ9UBP0 616 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 SLC12A6Q9UHW9 1150 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 KLF15Q9UIH9 416 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 PPM1HQ9ULR3 514 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 ZFR2Q9UPR6 939 aaKnown RBP7.05□□□□□ -1.28
HDAC1-204ENST00000471488 NAALADL1Q9UQQ1 740 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 PLAAQ9Y263 795 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 SSUH2Q9Y2M2 353 aa7.05□□□□□ -1.28
HDAC1-204ENST00000471488 UTP20O75691 2785 aaKnown RBP7.04□□□□□ -1.28
HDAC1-204ENST00000471488 SPTY2D1-AS1A0A0U1RR47 76 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 PVALEFA0A1B0GWK0 134 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 K7ERQ8 282 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 PDXKO00764 312 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 MCF2LO15068 1137 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 RAD51BO15315 384 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 NOBOXO60393 691 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 GCATO75600 419 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 AGFG2O95081 481 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 ADCY5O95622 1261 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 IGLV3-27P01718 113 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 CTSLP07711 333 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 SETSIPP0DME0 302 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 C7P10643 843 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 PRKAR1AP10644 381 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 CTSEP14091 401 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 WT1P19544 449 aaPredicted RBP7.04□□□□□ -1.28
HDAC1-204ENST00000471488 RRM1P23921 792 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 RABIFP47224 123 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 PDX1P52945 283 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 POLE2P56282 527 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 FOXK1P85037 733 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 SERINC3Q13530 473 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 SLC12A1Q13621 1099 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 PMF1Q6P1K2 205 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 MSANTD2Q6P1R3 559 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 LINGO4Q6UY18 593 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 ERN2Q76MJ5 926 aaKnown RBP7.04□□□□□ -1.28
HDAC1-204ENST00000471488 TAC4Q86UU9 113 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 VPS36Q86VN1 386 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms