RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 HSP90AA4PQ58FG1 418 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 RAB41Q5JT25 222 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 NUGGCQ68CJ6 796 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 ZCCHC8Q6NZY4 707 aaKnown RBP9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 ITIH6Q6UXX5 1313 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 C14orf80Q86SX3 495 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 CARNMT1Q8N4J0 409 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 AZIN2Q96A70 460 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 MRGPRX3Q96LB0 322 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 SPAG5Q96R06 1193 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 BAG1Q99933 345 aaPredicted RBP9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 CALN1Q9BXU9 219 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 CUEDC2Q9H467 287 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 LRRC4Q9HBW1 653 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 PREBQ9HCU5 417 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 UCKL1Q9NWZ5 548 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 SFMBT1Q9UHJ3 866 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 PPP2R2CQ9Y2T4 447 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 AKR1B15C9JRZ8 316 aaPredicted RBP9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 C1QTNF3-AMACRE9PGA6 284 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 H3BM21 787 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 K7ESM1 405 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 EFSO43281 561 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 ACSL4O60488 711 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 URI1O94763 535 aaPredicted RBP9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 CD58P19256 250 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 CASQ1P31415 396 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 STX17P56962 302 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 SULT2A1Q06520 285 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 EIF3IQ13347 325 aaKnown RBP9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 ZNF177Q13360 481 aaPredicted RBP9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 KNOP1Q1ED39 458 aaKnown RBP9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 POM121L1PQ3SYA9 428 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 FILIP1LQ4L180 1135 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 PITRM1Q5JRX3 1037 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 BSPRYQ5W0U4 402 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 SPECC1LQ69YQ0 1117 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 SPOPLQ6IQ16 392 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 KLHL10Q6JEL2 608 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 NEK5Q6P3R8 708 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 RFWD3Q6PCD5 774 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 SV2AQ7L0J3 742 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 PIGZQ86VD9 579 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 ANKRD52Q8NB46 1076 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 WFDC5Q8TCV5 224 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 TMC2Q8TDI7 906 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 OR8D1Q8WZ84 308 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 PTPRN2Q92932 1015 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 ELMO3Q96BJ8 720 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 PAGE5Q96GU1 130 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 PRR11Q96HE9 360 aaPredicted RBP9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 PKNOX2Q96KN3 472 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 LMLNQ96KR4 655 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 TWNKQ96RR1 684 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 GEMIN8Q9NWZ8 242 aaKnown RBP9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 DNAJC28Q9NX36 388 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 SALL4Q9UJQ4 1053 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 PCDHGA7Q9Y5G6 932 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 CSNK1G3Q9Y6M4 447 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 MYO9AB2RTY4 2548 aa9.17□□□□□ -0.94
SYNGAP1-205ENST00000470232 A0A1B0GTH6 734 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 GOLGA6L7A0A1B0GV03 622 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 EME2A4GXA9 379 aaPredicted RBP9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 SLC31A1O15431 190 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 STX10O60499 249 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 RTN2O75298 545 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 HLA-DRAP01903 254 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 TPM1P09493 284 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 FAM87AP0C7U9 286 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 GIMD1P0DJR0 217 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 DRD3P35462 400 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 SGSHP51688 502 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 GABPB1Q06547 395 aaPredicted RBP9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 SLC12A1Q13621 1099 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 NR0B2Q15466 257 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 CDKN3Q16667 212 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 ZNF394Q53GI3 561 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 MANEAQ5SRI9 462 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 CNNM4Q6P4Q7 775 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 FBXO38Q6PIJ6 1188 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 TRIM65Q6PJ69 517 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 EFL1Q7Z2Z2 1120 aaKnown RBP9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 JAMLQ86YT9 394 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 TMEM139Q8IV31 216 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 KRT222Q8N1A0 295 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 SIX6OS1Q8N1H7 587 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 FBXO39Q8N4B4 442 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 FAM26EQ8N5C1 309 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 PLEKHO2Q8TD55 490 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 EDEM1Q92611 657 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 FAM131CQ96AQ9 280 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 ARRDC3Q96B67 414 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 FAXDC2Q96IV6 333 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 RPL10LQ96L21 214 aaKnown RBP9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 ULBP1Q9BZM6 244 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 STRADBQ9C0K7 418 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 ADNPQ9H2P0 1102 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 LRRC4CQ9HCJ2 640 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 SAMSN1Q9NSI8 373 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms