RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TBXAS1P24557 533 aaPredicted RBP19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 BRD2P25440 801 aaKnown RBP19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 PLK1P53350 603 aa19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 NR0B2Q15466 257 aa19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 CNGA2Q16280 664 aa19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 DEFB133Q30KQ1 61 aa19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 SYPL2Q5VXT5 272 aa19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 GUF1Q8N442 669 aaKnown RBP19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 CCDC114Q96M63 670 aa19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 IL12RB2Q99665 862 aa19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 USP25Q9UHP3 1055 aa19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 TRPM6Q9BX84 2022 aa19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 TCAF2A6NFQ2 919 aa19.45■□□□□ 0.7
NCKIPSD-209ENST00000470006 SART1O43290 800 aaKnown RBP19.45■□□□□ 0.7
NCKIPSD-209ENST00000470006 LZTS3O60299 673 aaPredicted RBP19.45■□□□□ 0.7
NCKIPSD-209ENST00000470006 RHOBTB3O94955 611 aa19.45■□□□□ 0.7
NCKIPSD-209ENST00000470006 PAEPP09466 180 aa19.45■□□□□ 0.7
NCKIPSD-209ENST00000470006 TTC39BQ5VTQ0 682 aaPredicted RBP19.45■□□□□ 0.7
NCKIPSD-209ENST00000470006 SEL1L3Q68CR1 1132 aa19.45■□□□□ 0.7
NCKIPSD-209ENST00000470006 ZNF574Q6ZN55 896 aaPredicted RBP19.45■□□□□ 0.7
NCKIPSD-209ENST00000470006 ABI3BPQ7Z7G0 1075 aa19.45■□□□□ 0.7
NCKIPSD-209ENST00000470006 JAMLQ86YT9 394 aa19.45■□□□□ 0.7
NCKIPSD-209ENST00000470006 FAM174AQ8TBP5 190 aa19.45■□□□□ 0.7
NCKIPSD-209ENST00000470006 LMX1AQ8TE12 382 aa19.45■□□□□ 0.7
NCKIPSD-209ENST00000470006 EXTL1Q92935 676 aa19.45■□□□□ 0.7
NCKIPSD-209ENST00000470006 RPRD1AQ96P16 312 aaPredicted RBP19.45■□□□□ 0.7
NCKIPSD-209ENST00000470006 FEM1AQ9BSK4 669 aa19.45■□□□□ 0.7
NCKIPSD-209ENST00000470006 AHCTF1Q8WYP5 2266 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 SYNJ2BP-COX16A0A087WUM0 186 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 CCDC187A0A096LP49 1063 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 KCNU1A8MYU2 1149 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 TERTO14746 1132 aaKnown RBP19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 AQP9O43315 295 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 TCEA3O75764 348 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 TRUB2O95900 331 aaKnown RBP19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 CALCAP01258 141 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 PRR29P0C7W0 189 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 PFKFB1P16118 471 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 CHRNA3P32297 505 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 FZD2Q14332 565 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 DRAP1Q14919 205 aaPredicted RBP19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 STILQ15468 1287 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 LINC00303Q3SY05 128 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 CXorf57Q6NSI4 855 aaKnown RBP19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 CLEC14AQ86T13 490 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 SH2D3CQ8N5H7 860 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 ATP11CQ8NB49 1132 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 GLMNQ92990 594 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 SGF29Q96ES7 293 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 TRIM62Q9BVG3 475 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 MUC3BQ9H195 1237 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 COX16Q9P0S2 106 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 CFAP45Q9UL16 551 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 ATXN7L1Q9ULK2 861 aaPredicted RBP19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 ZFR2Q9UPR6 939 aaKnown RBP19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 HS3ST3A1Q9Y663 406 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 CSNK1G3Q9Y6M4 447 aa19.44■□□□□ 0.7
NCKIPSD-209ENST00000470006 EME2A4GXA9 379 aaPredicted RBP19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 CSF2P04141 144 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 NTRK1P04629 796 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 CTSLP07711 333 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 ITGA2BP08514 1039 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 JUNDP17535 347 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 MLLT3P42568 568 aaPredicted RBP19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 RPIAP49247 311 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 VASPP50552 380 aaPredicted RBP19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 CENPCQ03188 943 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 SPIDRQ14159 915 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 EDRF1Q3B7T1 1238 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 PERM1Q5SV97 790 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 XKR5Q6UX68 686 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 PARGQ86W56 976 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 BMFQ96LC9 184 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 FAM204AQ9H8W3 233 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 SALL4Q9UJQ4 1053 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 COQ4Q9Y3A0 265 aa19.43■□□□□ 0.7
NCKIPSD-209ENST00000470006 POM121BA6NF01 834 aa19.42■□□□□ 0.7
NCKIPSD-209ENST00000470006 EFSO43281 561 aa19.42■□□□□ 0.7
NCKIPSD-209ENST00000470006 PAK4O96013 591 aaPredicted RBP19.42■□□□□ 0.7
NCKIPSD-209ENST00000470006 PRNPP04156 253 aa19.42■□□□□ 0.7
NCKIPSD-209ENST00000470006 FAM87AP0C7U9 286 aa19.42■□□□□ 0.7
NCKIPSD-209ENST00000470006 NME1P15531 152 aaKnown RBP19.42■□□□□ 0.7
NCKIPSD-209ENST00000470006 INHBCP55103 352 aa19.42■□□□□ 0.7
NCKIPSD-209ENST00000470006 ZCWPW2Q504Y3 356 aa19.42■□□□□ 0.7
NCKIPSD-209ENST00000470006 ERN2Q76MJ5 926 aaKnown RBP19.42■□□□□ 0.7
NCKIPSD-209ENST00000470006 UBR7Q8N806 425 aa19.42■□□□□ 0.7
NCKIPSD-209ENST00000470006 GRIN3AQ8TCU5 1115 aa19.42■□□□□ 0.7
NCKIPSD-209ENST00000470006 ZSWIM1Q9BR11 485 aa19.42■□□□□ 0.7
NCKIPSD-209ENST00000470006 SLC17A9Q9BYT1 436 aa19.42■□□□□ 0.7
NCKIPSD-209ENST00000470006 EPB41L5Q9HCM4 733 aa19.42■□□□□ 0.7
NCKIPSD-209ENST00000470006 STARD5Q9NSY2 213 aa19.42■□□□□ 0.7
NCKIPSD-209ENST00000470006 COL27A1Q8IZC6 1860 aaPredicted RBP19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 SPTY2D1-AS1A0A0U1RR47 76 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 RNF225M0QZC1 329 aaPredicted RBP19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 RIOK3O14730 519 aaKnown RBP19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 SLC2A3P11169 496 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 SFTPCP11686 197 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 SLC5A2P31639 672 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 RABIFP47224 123 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms