RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 GSDMBQ8TAX9 411 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 ADAMTS19Q8TE59 1207 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 NSMCE1Q8WV22 266 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 DDX50Q9BQ39 737 aaKnown RBP18.48■□□□□ 0.55
SMC4-211ENST00000469858 NT5MQ9NPB1 228 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 MAN1C1Q9NR34 630 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 HCFC1R1Q9NWW0 138 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 AAR2Q9Y312 384 aaKnown RBP18.48■□□□□ 0.55
SMC4-211ENST00000469858 PCDHA11Q9Y5I1 949 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 MIA3Q5JRA6 1907 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 A0A0D9SEW6 157 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 H3BNC9 293 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 RFPL2O75678 378 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 ANXA9O76027 345 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 GSTA2P09210 222 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 MSH2P43246 934 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 IL10RBQ08334 325 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 STXBP5Q5T5C0 1151 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 MARC1Q5VT66 337 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 LEKR1Q6ZMV7 388 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 SRRM1Q8IYB3 904 aaKnown RBP18.48■□□□□ 0.55
SMC4-211ENST00000469858 OR52K2Q8NGK3 314 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 ARNTL2Q8WYA1 636 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 FATE1Q969F0 183 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 CASS4Q9NQ75 786 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.48■□□□□ 0.55
SMC4-211ENST00000469858 CHD7Q9P2D1 2997 aa18.47■□□□□ 0.55
SMC4-211ENST00000469858 PSMD3O43242 534 aa18.47■□□□□ 0.55
SMC4-211ENST00000469858 SHOX2O60902 331 aaPredicted RBP18.47■□□□□ 0.55
SMC4-211ENST00000469858 CLDN11O75508 207 aa18.47■□□□□ 0.55
SMC4-211ENST00000469858 CREB1P16220 341 aa18.47■□□□□ 0.55
SMC4-211ENST00000469858 KRT15P19012 456 aa18.47■□□□□ 0.55
SMC4-211ENST00000469858 MDH1P40925 334 aaKnown RBP18.47■□□□□ 0.55
SMC4-211ENST00000469858 GNA12Q03113 381 aa18.47■□□□□ 0.55
SMC4-211ENST00000469858 NAPEPLDQ6IQ20 393 aa18.47■□□□□ 0.55
SMC4-211ENST00000469858 IPMKQ8NFU5 416 aa18.47■□□□□ 0.55
SMC4-211ENST00000469858 OR7D4Q8NG98 312 aa18.47■□□□□ 0.55
SMC4-211ENST00000469858 MDM1Q8TC05 714 aa18.47■□□□□ 0.55
SMC4-211ENST00000469858 DHRS4Q9BTZ2 278 aa18.47■□□□□ 0.55
SMC4-211ENST00000469858 CNOT10Q9H9A5 744 aaKnown RBP18.47■□□□□ 0.55
SMC4-211ENST00000469858 SAMD15Q9P1V8 674 aa18.47■□□□□ 0.55
SMC4-211ENST00000469858 A0A1B0GVM2 712 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 TCAF2A6NFQ2 919 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 RB1P06400 928 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 ETFBP38117 255 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 IFNAR2P48551 515 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 MAXP61244 160 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 RASA2Q15283 850 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 TRMT10BQ6PF06 316 aaKnown RBP18.46■□□□□ 0.55
SMC4-211ENST00000469858 CTAGE3PQ8IX95 158 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 KLHDC8BQ8IXV7 354 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 RETREG1Q9H6L5 497 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 BFARQ9NZS9 450 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 STOML2Q9UJZ1 356 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 IKBKGQ9Y6K9 419 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 HELZP42694 1942 aaKnown RBP18.46■□□□□ 0.55
SMC4-211ENST00000469858 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.46■□□□□ 0.55
SMC4-211ENST00000469858 TRAV19A0A0A6YYK7 116 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 GREM1O60565 184 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 LATS1O95835 1130 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 C1QAP02745 245 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 RHOCP08134 193 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 EPCAMP16422 314 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 PGAM1P18669 254 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 PRKCHP24723 683 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 GEMP55040 296 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 ITKQ08881 620 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 ZNF177Q13360 481 aaPredicted RBP18.46■□□□□ 0.55
SMC4-211ENST00000469858 SHHQ15465 462 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 IL31Q6EBC2 164 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 ADGRD1Q6QNK2 874 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 CHST9Q7L1S5 443 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 LINC00523Q86TU6 105 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 PPM1NQ8N819 430 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 DCAKDQ8WVC6 231 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 PPP1R2P1Q96PQ5 205 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 MAGEH1Q9H213 219 aa18.46■□□□□ 0.55
SMC4-211ENST00000469858 PRAMEF11O60813 436 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 PMPCBO75439 489 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 INHBAP08476 426 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 CCR2P41597 374 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 NR1H3Q13133 447 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 CERCAMQ5T4B2 595 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 STEAP4Q687X5 459 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 Q6ZNB5 142 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 TRABD2AQ86V40 505 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 CCNJLQ8IV13 435 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 SLC44A1Q8WWI5 657 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 TGS1Q96RS0 853 aaKnown RBP18.45■□□□□ 0.54
SMC4-211ENST00000469858 TBL1YQ9BQ87 522 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 NAT9Q9BTE0 207 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 SPON2Q9BUD6 331 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 FICDQ9BVA6 458 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 SLC25A51Q9H1U9 297 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 CFAP97Q9P2B7 532 aa18.45■□□□□ 0.54
SMC4-211ENST00000469858 LSM7Q9UK45 103 aaKnown RBP18.45■□□□□ 0.54
SMC4-211ENST00000469858 CXorf49A8MYA2 514 aaPredicted RBP18.44■□□□□ 0.54
SMC4-211ENST00000469858 PER2O15055 1255 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 ATP9BO43861 1147 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 CLASP2O75122 1294 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms