RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 BMP8AQ7Z5Y6 402 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 TMEM105Q8N8V8 129 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 TXNDC5Q8NBS9 432 aaKnown RBP15.1■□□□□ 0.01
COL9A3-209ENST00000469852 COG1Q8WTW3 980 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 UBE2Q2Q8WVN8 375 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 PBXIP1Q96AQ6 731 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 OLFM3Q96PB7 478 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 SMARCAL1Q9NZC9 954 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 IPO11Q9UI26 975 aaKnown RBP15.1■□□□□ 0.01
COL9A3-209ENST00000469852 EFR3BQ9Y2G0 817 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 R3HDM2Q9Y2K5 976 aaKnown RBP15.1■□□□□ 0.01
COL9A3-209ENST00000469852 CKAP5Q14008 2032 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 TIMM44O43615 452 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 PEX11BO96011 259 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 ASLP04424 464 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 ZFXP17010 805 aaPredicted RBP15.09■□□□□ 0.01
COL9A3-209ENST00000469852 TGM2P21980 687 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 ETFBP38117 255 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 GARSP41250 739 aaKnown RBP15.09■□□□□ 0.01
COL9A3-209ENST00000469852 MRPS21P82921 87 aaKnown RBP15.09■□□□□ 0.01
COL9A3-209ENST00000469852 SULT2A1Q06520 285 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 ENPP2Q13822 863 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 FNDC3BQ53EP0 1204 aaKnown RBP15.09■□□□□ 0.01
COL9A3-209ENST00000469852 ADAT2Q7Z6V5 191 aaKnown RBP15.09■□□□□ 0.01
COL9A3-209ENST00000469852 CHPFQ8IZ52 775 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 SH2D3CQ8N5H7 860 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 UCMAQ8WVF2 138 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 ACDQ96AP0 544 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 ZNF419Q96HQ0 510 aaPredicted RBP15.09■□□□□ 0.01
COL9A3-209ENST00000469852 MS4A14Q96JA4 679 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 C16orf45Q96MC5 204 aaPredicted RBP15.09■□□□□ 0.01
COL9A3-209ENST00000469852 OSBPL9Q96SU4 736 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 LGMNQ99538 433 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 CHRDQ9H2X0 955 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 TMEM245Q9H330 911 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 DONSONQ9NYP3 566 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 SLC25A13Q9UJS0 675 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 SNX12Q9UMY4 172 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 HS3ST2Q9Y278 367 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 FCF1Q9Y324 198 aaKnown RBP15.09■□□□□ 0.01
COL9A3-209ENST00000469852 RAD54BQ9Y620 910 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 STON1Q9Y6Q2 735 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 KMT2EQ8IZD2 1858 aa15.09■□□□□ 0.01
COL9A3-209ENST00000469852 APOC4-APOC2K7ER74 178 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 ZNF185O15231 689 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 CEP104O60308 925 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 ZNF821O75541 412 aaPredicted RBP15.08■□□□□ 0
COL9A3-209ENST00000469852 APOC2P02655 101 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 SRPRAP08240 638 aaKnown RBP15.08■□□□□ 0
COL9A3-209ENST00000469852 MSNP26038 577 aaKnown RBP15.08■□□□□ 0
COL9A3-209ENST00000469852 RPS9P46781 194 aaKnown RBP15.08■□□□□ 0
COL9A3-209ENST00000469852 SERPINH1P50454 418 aaKnown RBP15.08■□□□□ 0
COL9A3-209ENST00000469852 ETF1P62495 437 aaKnown RBP15.08■□□□□ 0
COL9A3-209ENST00000469852 OTUD4Q01804 1114 aaKnown RBP15.08■□□□□ 0
COL9A3-209ENST00000469852 MTAPQ13126 283 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 NOMO1Q15155 1222 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 SIX1Q15475 284 aaPredicted RBP15.08■□□□□ 0
COL9A3-209ENST00000469852 PAPD7Q5XG87 772 aaKnown RBP15.08■□□□□ 0
COL9A3-209ENST00000469852 KIAA1211LQ6NV74 962 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 TMEM92Q6UXU6 159 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 SYT10Q6XYQ8 523 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 SLC13A5Q86YT5 568 aaPredicted RBP15.08■□□□□ 0
COL9A3-209ENST00000469852 SYNPOQ8N3V7 929 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 ATPAF2Q8N5M1 289 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 PRSS33Q8NF86 280 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 ACTL9Q8TC94 416 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 FRS2Q8WU20 508 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 NAPGQ99747 312 aaPredicted RBP15.08■□□□□ 0
COL9A3-209ENST00000469852 GABRG3Q99928 467 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 C10orf88Q9H8K7 445 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 PRDM16Q9HAZ2 1276 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 CD248Q9HCU0 757 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 PLA2G4CQ9UP65 541 aa15.08■□□□□ 0
COL9A3-209ENST00000469852 A0A1W2PQF6 199 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 CHURC1-FNTBB4DL54 471 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 NCAM2O15394 837 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 ATP9BO43861 1147 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 TJP3O95049 919 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 NTSR1P30989 418 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 CETN2P41208 172 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 CLCN5P51795 746 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 IL10RBQ08334 325 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 CYTH1Q15438 398 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 DLG2Q15700 870 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 RETSATQ6NUM9 610 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 SERPINA13PQ6UXR4 307 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 ZC3H18Q86VM9 953 aaKnown RBP15.07■□□□□ 0
COL9A3-209ENST00000469852 ZSCAN30Q86W11 494 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 RASGEF1CQ8N431 466 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 FBXL6Q8N531 539 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 ATP11CQ8NB49 1132 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 KCNV2Q8TDN2 545 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 ATG4AQ8WYN0 398 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 P3H4Q92791 437 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 HDAC11Q96DB2 347 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 PHOX2BQ99453 314 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 TNKS2Q9H2K2 1166 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 SP110Q9HB58 689 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 UBA2Q9UBT2 640 aaPredicted RBP15.07■□□□□ 0
COL9A3-209ENST00000469852 MMP17Q9ULZ9 603 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms