RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 NOMO2Q5JPE7 1267 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 L1TD1Q5T7N2 865 aaKnown RBP6.71□□□□□ -1.34
PTCD3-208ENST00000469585 ADALQ6DHV7 355 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 FAM173BQ6P4H8 233 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 USP37Q86T82 979 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 MRPS27Q92552 414 aaKnown RBP6.71□□□□□ -1.34
PTCD3-208ENST00000469585 TTC17Q96AE7 1141 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 HVCN1Q96D96 273 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 MTFMTQ96DP5 389 aaKnown RBP6.71□□□□□ -1.34
PTCD3-208ENST00000469585 EPSTI1Q96J88 318 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 APOL6Q9BWW8 343 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 PACSIN1Q9BY11 444 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 PANK2Q9BZ23 570 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 KLC2Q9H0B6 622 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 LMAN2LQ9H0V9 348 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 TMEM206Q9H813 350 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 EXOC1Q9NV70 894 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 SMPD4Q9NXE4 827 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 JKAMPQ9P055 326 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 ANKFY1Q9P2R3 1169 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 SCN5AQ14524 2016 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 A0A087WWV3 80 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 ARHGEF37A1IGU5 675 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 LINC01553A4QN01 128 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 LEFTY2O00292 366 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 TRAPPC3O43617 180 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 TSPAN1O60635 241 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 KINO60870 393 aaKnown RBP6.7□□□□□ -1.34
PTCD3-208ENST00000469585 CSDE1O75534 798 aaKnown RBP6.7□□□□□ -1.34
PTCD3-208ENST00000469585 STBD1O95210 358 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 HARSP12081 509 aaKnown RBP6.7□□□□□ -1.34
PTCD3-208ENST00000469585 CMA1P23946 247 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 CHN2P52757 468 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 PTTG1IPP53801 180 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 SLC12A3P55017 1021 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 HTRA4P83105 476 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-208ENST00000469585 UBE3AQ05086 875 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 MBTD1Q05BQ5 628 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 GPM6BQ13491 265 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 STIM1Q13586 685 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 GIT2Q14161 759 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 PTPAQ15257 358 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 CCDC149Q6ZUS6 474 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 C1orf186Q6ZWK4 172 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 MED25Q71SY5 747 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 HAUS6Q7Z4H7 955 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 CELF5Q8N6W0 485 aaKnown RBP6.7□□□□□ -1.34
PTCD3-208ENST00000469585 FSIP1Q8NA03 581 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 MAFAQ8NHW3 353 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-208ENST00000469585 NOC3LQ8WTT2 800 aaKnown RBP6.7□□□□□ -1.34
PTCD3-208ENST00000469585 P2RX5Q93086 422 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 CPB2Q96IY4 423 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 ACCSQ96QU6 501 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 NEU1Q99519 415 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 REEP2Q9BRK0 252 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 COLEC11Q9BWP8 271 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 ZMAT3Q9HA38 289 aaKnown RBP6.7□□□□□ -1.34
PTCD3-208ENST00000469585 CERS4Q9HA82 394 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 XPNPEP1Q9NQW7 623 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 ENTPD7Q9NQZ7 604 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 PANK4Q9NVE7 773 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 RMND1Q9NWS8 449 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 SPG21Q9NZD8 308 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 ZDHHC8Q9ULC8 765 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 WDR81Q562E7 1941 aa6.7□□□□□ -1.34
PTCD3-208ENST00000469585 ZMYM2Q9UBW7 1377 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 TRIOBPQ9H2D6 2365 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 TNRC18O15417 2968 aaPredicted RBP6.69□□□□□ -1.34
PTCD3-208ENST00000469585 MICAL3Q7RTP6 2002 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 ARID2Q68CP9 1835 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 A0A1B0GUA9 196 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 CDHR4A6H8M9 788 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 TOM1L1O75674 476 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 PRSS23O95084 383 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 LDHAP00338 332 aaKnown RBP6.69□□□□□ -1.34
PTCD3-208ENST00000469585 AHSGP02765 367 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 ITGB1P05556 798 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 THP07101 528 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 MCF2P10911 925 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 MYOGP15173 224 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 ARF4P18085 180 aaPredicted RBP6.69□□□□□ -1.34
PTCD3-208ENST00000469585 TRIM21P19474 475 aaKnown RBP6.69□□□□□ -1.34
PTCD3-208ENST00000469585 ACRV1P26436 265 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 BMPR1AP36894 532 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 FAM193AP78312 1265 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 NHLH2Q02577 135 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 TAP1Q03518 808 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 EFEMP1Q12805 493 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 ELAVL2Q12926 359 aaKnown RBP6.69□□□□□ -1.34
PTCD3-208ENST00000469585 GRIK3Q13003 919 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 PRKD1Q15139 912 aaPredicted RBP6.69□□□□□ -1.34
PTCD3-208ENST00000469585 IL17AQ16552 155 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 EPC2Q52LR7 807 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 FAM102AQ5T9C2 384 aaPredicted RBP6.69□□□□□ -1.34
PTCD3-208ENST00000469585 EMC10Q5UCC4 262 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 RNF220Q5VTB9 566 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 RESP18Q5W5W9 173 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 PDXDC1Q6P996 788 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 FITM2Q8N6M3 262 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 GOLGA5Q8TBA6 731 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms