RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 MX2P20592 715 aa19.43■□□□□ 0.7
VIM-203ENST00000469543 STXBP5Q5T5C0 1151 aa19.43■□□□□ 0.7
VIM-203ENST00000469543 DCLRE1AQ6PJP8 1040 aa19.43■□□□□ 0.7
VIM-203ENST00000469543 ZNF280BQ86YH2 543 aa19.43■□□□□ 0.7
VIM-203ENST00000469543 IFNL1Q8IU54 200 aa19.43■□□□□ 0.7
VIM-203ENST00000469543 MFSD6LQ8IWD5 586 aa19.43■□□□□ 0.7
VIM-203ENST00000469543 SCN4BQ8IWT1 228 aa19.43■□□□□ 0.7
VIM-203ENST00000469543 DMAP1Q9NPF5 467 aaPredicted RBP19.43■□□□□ 0.7
VIM-203ENST00000469543 SBK3P0C264 359 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 AIF1P55008 147 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 PCSK7Q16549 785 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 TMEM151AQ8N4L1 468 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 PPP4R1Q8TF05 950 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 RSPH1Q8WYR4 309 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 NMRAL1Q9HBL8 299 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 NMRK2Q9NPI5 230 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 NEMP1O14524 444 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 GPR182O15218 404 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 ZBTB14O43829 449 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 MAFKO60675 156 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 PDE5AO76074 875 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 SERPINB8P50452 374 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 EPHB1P54762 984 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 MGAT3Q09327 533 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 DDR2Q16832 855 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 ARTNQ5T4W7 220 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 TFAP2DQ7Z6R9 452 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 SCD5Q86SK9 330 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 CEP97Q8IW35 865 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 SCG3Q8WXD2 468 aaKnown RBP19.42■□□□□ 0.7
VIM-203ENST00000469543 CCDC124Q96CT7 223 aaKnown RBP19.42■□□□□ 0.7
VIM-203ENST00000469543 OR52B2Q96RD2 323 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 PKMYT1Q99640 499 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 TASP1Q9H6P5 420 aa19.42■□□□□ 0.7
VIM-203ENST00000469543 A0A088AWK7 358 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 SERPINB6P35237 376 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 MAGEA12P43365 314 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 CDH17Q12864 832 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 LPIN1Q14693 890 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 CNGA3Q16281 694 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 KCNA10Q16322 511 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 MUM1Q2TAK8 710 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 FAM91A1Q658Y4 838 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 SLC41A1Q8IVJ1 513 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 HIPK4Q8NE63 616 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 KCTD4Q8WVF5 259 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 STMN2Q93045 179 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 TTC1Q99614 292 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 IL22Q9GZX6 179 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 TRHDEQ9UKU6 1024 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 HSPA4LO95757 839 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 GRK4P32298 578 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 RPL9P32969 192 aaKnown RBP19.41■□□□□ 0.7
VIM-203ENST00000469543 MAXP61244 160 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 DENND5AQ6IQ26 1287 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 CLEC14AQ86T13 490 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 KBTBD2Q8IY47 623 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 CFAP61Q8NHU2 1237 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 DNAJC9Q8WXX5 260 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 SGF29Q96ES7 293 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 B3GALT6Q96L58 329 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 FICDQ9BVA6 458 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 GATA5Q9BWX5 397 aaPredicted RBP19.41■□□□□ 0.7
VIM-203ENST00000469543 ABI2Q9NYB9 513 aaPredicted RBP19.41■□□□□ 0.7
VIM-203ENST00000469543 SOX13Q9UN79 622 aa19.41■□□□□ 0.7
VIM-203ENST00000469543 A0A0U1RQF3 1178 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 CCL22O00626 93 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 TM7SF2O76062 418 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 TBX18O95935 607 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 JUNP05412 331 aaKnown RBP19.4■□□□□ 0.7
VIM-203ENST00000469543 ARNTP27540 789 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 TUBP50607 506 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 USP10Q14694 798 aaKnown RBP19.4■□□□□ 0.7
VIM-203ENST00000469543 C1orf146Q5VVC0 180 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 BTBD8Q5XKL5 378 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 ITPRIPL1Q6GPH6 555 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 ANO7Q6IWH7 933 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 ZC3HC1Q86WB0 502 aaKnown RBP19.4■□□□□ 0.7
VIM-203ENST00000469543 MAB21L3Q8N8X9 362 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 OR6Y1Q8NGX8 325 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 MICAL1Q8TDZ2 1067 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 MCMBPQ9BTE3 642 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 PRDM16Q9HAZ2 1276 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 CHST12Q9NRB3 414 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 SCN10AQ9Y5Y9 1956 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 SOAT2O75908 522 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 AOC1P19801 751 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 MPSTP25325 297 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 HARS2P49590 506 aaKnown RBP19.4■□□□□ 0.7
VIM-203ENST00000469543 FLT3LGP49771 235 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 EIF4EBP2Q13542 120 aaPredicted RBP19.4■□□□□ 0.7
VIM-203ENST00000469543 INSCQ1MX18 579 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 SLC39A12Q504Y0 691 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 PDPK2PQ6A1A2 396 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 FRMD7Q6ZUT3 714 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 METTL23Q86XA0 190 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 ATPAF2Q8N5M1 289 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 MIEF2Q96C03 454 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 BRD8Q9H0E9 1235 aa19.4■□□□□ 0.7
VIM-203ENST00000469543 RUVBL2Q9Y230 463 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms