RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 TBC1D3DA0A087WVF3 549 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 TBC1D3IA0A087WXS9 549 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 TBC1D3EA0A087X179 549 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 TBC1D3KA0A087X1G2 549 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 A0A1B0GVT2 93 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 TBC1D3FA6NER0 549 aaPredicted RBP11.8□□□□□ -0.52
CDHR3-205ENST00000468143 TMEM191CA6NGB0 347 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 TBC1D3LB9A6J9 549 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 KCNK3O14649 394 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 GYPCP04921 128 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 IGHV4-34P06331 123 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 CTSLP07711 333 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 TBC1D3HP0C7X1 549 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 GZMAP12544 262 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 EPHB2P29323 1055 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 CASP14P31944 242 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 L1CAMP32004 1257 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 CHRNA3P32297 505 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 DRD3P35462 400 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 NOVA1P51513 510 aaKnown RBP11.8□□□□□ -0.52
CDHR3-205ENST00000468143 BNC1Q01954 994 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 ZNF252P-AS1Q0IIN9 211 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 SCAPQ12770 1279 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 GRIK2Q13002 908 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 CA9Q16790 459 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 ARSIQ5FYB1 569 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 N4BP2L1Q5TBK1 243 aaPredicted RBP11.8□□□□□ -0.52
CDHR3-205ENST00000468143 FAM46CQ5VWP2 391 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 TBC1D3GQ6DHY5 549 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 TBC1D3CQ6IPX1 549 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 PSAPL1Q6NUJ1 521 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 RETSATQ6NUM9 610 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 PPP1R2P3Q6NXS1 205 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 ZNF783Q6ZMS7 281 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 DSG4Q86SJ6 1040 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 ZNF354CQ86Y25 554 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 TBC1D3Q8IZP1 549 aaPredicted RBP11.8□□□□□ -0.52
CDHR3-205ENST00000468143 NETO2Q8NC67 525 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 C1orf216Q8TAB5 229 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 ARHGEF2Q92974 986 aaKnown RBP11.8□□□□□ -0.52
CDHR3-205ENST00000468143 ACE2Q9BYF1 805 aaPredicted RBP11.8□□□□□ -0.52
CDHR3-205ENST00000468143 ISCUQ9H1K1 167 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 PCED1AQ9H1Q7 454 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 EBF2Q9HAK2 575 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 IL21RQ9HBE5 538 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 FZD4Q9ULV1 537 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 LUC7L2Q9Y383 392 aaKnown RBP11.8□□□□□ -0.52
CDHR3-205ENST00000468143 FARP1Q9Y4F1 1045 aaPredicted RBP11.8□□□□□ -0.52
CDHR3-205ENST00000468143 CKAP5Q14008 2032 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 SPAG17Q6Q759 2223 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 PLXND1Q9Y4D7 1925 aa11.8□□□□□ -0.52
CDHR3-205ENST00000468143 TNRC6BQ9UPQ9 1833 aaKnown RBP11.79□□□□□ -0.52
CDHR3-205ENST00000468143 LRRC72A6NJI9 287 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 C1QTNF3-AMACRE9PGA6 284 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 KPNA3O00505 521 aaPredicted RBP11.79□□□□□ -0.52
CDHR3-205ENST00000468143 OPHN1O60890 802 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 RAMP2O60895 175 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 ZNF821O75541 412 aaPredicted RBP11.79□□□□□ -0.52
CDHR3-205ENST00000468143 CD160O95971 181 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 SERPING1P05155 500 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 DESP17661 470 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 CD27P26842 260 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 MAPKAPK2P49137 400 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 SERPINH1P50454 418 aaKnown RBP11.79□□□□□ -0.52
CDHR3-205ENST00000468143 ADPRHP54922 357 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 CNTN1Q12860 1018 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 POLD3Q15054 466 aaPredicted RBP11.79□□□□□ -0.52
CDHR3-205ENST00000468143 C22orf39Q6P5X5 142 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 DPY19L3Q6ZPD9 716 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 DEFB124Q8NES8 71 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 OR2T34Q8NGX1 318 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 GRIN3AQ8TCU5 1115 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 SYN2Q92777 582 aaPredicted RBP11.79□□□□□ -0.52
CDHR3-205ENST00000468143 ARRDC3Q96B67 414 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 PEBP4Q96S96 227 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 ORAI3Q9BRQ5 295 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 THAP2Q9H0W7 228 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 DHX35Q9H5Z1 703 aaKnown RBP11.79□□□□□ -0.52
CDHR3-205ENST00000468143 TM9SF3Q9HD45 589 aa11.79□□□□□ -0.52
CDHR3-205ENST00000468143 BZW2Q9Y6E2 419 aaKnown RBP11.79□□□□□ -0.52
CDHR3-205ENST00000468143 NUP205Q92621 2012 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 A0A087X0T9 212 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 A0A1W2PPC4 97 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 WNT9AO14904 365 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 ALOX15BO15296 676 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 RNF8O76064 485 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 FAM228BP0C875 321 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 MIPP30301 263 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 MAT2AP31153 395 aaKnown RBP11.78□□□□□ -0.52
CDHR3-205ENST00000468143 GKP32189 559 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 RECQLP46063 649 aaPredicted RBP11.78□□□□□ -0.52
CDHR3-205ENST00000468143 CLCN6P51797 869 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 PPP2CBP62714 309 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 PPP2CAP67775 309 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 SLC20A2Q08357 652 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 SEMA3BQ13214 749 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 KIF19Q2TAC6 998 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 HLA-BQ31612 363 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 CARD16Q5EG05 197 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 KCNT1Q5JUK3 1230 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms