RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 KIAA1958Q8N8K9 716 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.38□□□□□ -0.75
MSH5-213ENST00000468136 GPR152Q8TDT2 470 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 DEPDC1BQ8WUY9 529 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 ARNTL2Q8WYA1 636 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 ATP2A3Q93084 1043 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 CPNE1Q99829 537 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 TBL1YQ9BQ87 522 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 KIFC1Q9BW19 673 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 KLF16Q9BXK1 252 aaPredicted RBP10.38□□□□□ -0.75
MSH5-213ENST00000468136 FSD1LQ9BXM9 530 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 VPS11Q9H270 941 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 CCSER2Q9H7U1 834 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 PPANQ9NQ55 473 aaKnown RBP10.38□□□□□ -0.75
MSH5-213ENST00000468136 MPP6Q9NZW5 540 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 ZNF212Q9UDV6 495 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 LSM7Q9UK45 103 aaKnown RBP10.38□□□□□ -0.75
MSH5-213ENST00000468136 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.37□□□□□ -0.75
MSH5-213ENST00000468136 TYROBPO43914 113 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 PRAMEF11O60813 436 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 BANF1O75531 89 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 STC2O76061 302 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 PAPSS2O95340 614 aaPredicted RBP10.37□□□□□ -0.75
MSH5-213ENST00000468136 C1QAP02745 245 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 F11P03951 625 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 ALADP13716 330 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 KRT4P19013 534 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 CA4P22748 312 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 ADRA1DP25100 572 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 ITGB8P26012 769 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 MGAT1P26572 445 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 HOXA9P31269 272 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 SPRP35270 261 aaPredicted RBP10.37□□□□□ -0.75
MSH5-213ENST00000468136 BMPR1AP36894 532 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 GP5P40197 560 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 CCT5P48643 541 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 CSE1LP55060 971 aaKnown RBP10.37□□□□□ -0.75
MSH5-213ENST00000468136 SESN2P58004 480 aaPredicted RBP10.37□□□□□ -0.75
MSH5-213ENST00000468136 SLC7A9P82251 487 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 ZNF177Q13360 481 aaPredicted RBP10.37□□□□□ -0.75
MSH5-213ENST00000468136 INSCQ1MX18 579 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 MPP7Q5T2T1 576 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 HHATQ5VTY9 493 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 PDPK2PQ6A1A2 396 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 ALG1LQ6GMV1 187 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 LILRA6Q6PI73 481 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 CAPN12Q6ZSI9 719 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 OTOP2Q7RTS6 562 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 LGI2Q8N0V4 545 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 PPHLN1Q8NEY8 458 aaKnown RBP10.37□□□□□ -0.75
MSH5-213ENST00000468136 OR52K1Q8NGK4 314 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 DENND1AQ8TEH3 1009 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 MZB1Q8WU39 189 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 SCG3Q8WXD2 468 aaKnown RBP10.37□□□□□ -0.75
MSH5-213ENST00000468136 ZBTB9Q96C00 473 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 IMP4Q96G21 291 aaKnown RBP10.37□□□□□ -0.75
MSH5-213ENST00000468136 CERS2Q96G23 380 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 APOPT1Q96IL0 206 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 ZNF317Q96PQ6 595 aaPredicted RBP10.37□□□□□ -0.75
MSH5-213ENST00000468136 RANBP9Q96S59 729 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 MLPHQ9BV36 600 aaPredicted RBP10.37□□□□□ -0.75
MSH5-213ENST00000468136 POLR1EQ9GZS1 481 aaKnown RBP10.37□□□□□ -0.75
MSH5-213ENST00000468136 IQCGQ9H095 443 aaKnown RBP10.37□□□□□ -0.75
MSH5-213ENST00000468136 NOL6Q9H6R4 1146 aaKnown RBP10.37□□□□□ -0.75
MSH5-213ENST00000468136 PRDM10Q9NQV6 1147 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 ZFATQ9P243 1243 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 CTNNAL1Q9UBT7 734 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 PRKAG3Q9UGI9 489 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 SEPT3Q9UH03 358 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 RIMKLBQ9ULI2 386 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 TBC1D30Q9Y2I9 924 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 ARIH1Q9Y4X5 557 aaPredicted RBP10.37□□□□□ -0.75
MSH5-213ENST00000468136 SLC4A7Q9Y6M7 1214 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 RPS6KL1Q9Y6S9 549 aa10.37□□□□□ -0.75
MSH5-213ENST00000468136 KIAA0100Q14667 2235 aaKnown RBP10.36□□□□□ -0.75
MSH5-213ENST00000468136 GOLGA6L7A0A1B0GV03 622 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 HEATR9A2RTY3 570 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 TIMM44O43615 452 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 KDELR3O43731 214 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 ASMTLO95671 621 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 CXCL14O95715 111 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 PEX11BO96011 259 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 GLUD1P00367 558 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 ACRP10323 421 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 MBL2P11226 248 aaPredicted RBP10.36□□□□□ -0.75
MSH5-213ENST00000468136 HLA-DPA1P20036 260 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 CORO1AP31146 461 aaKnown RBP10.36□□□□□ -0.75
MSH5-213ENST00000468136 ADRA1AP35348 466 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 CCNFP41002 786 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 GNA12Q03113 381 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 NIPAL4Q0D2K0 466 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 LBRQ14739 615 aaKnown RBP10.36□□□□□ -0.75
MSH5-213ENST00000468136 PDK4Q16654 411 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 ANKRD20A4Q4UJ75 823 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 ALFQ53S48 1182 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 FAM133BQ5BKY9 247 aaKnown RBP10.36□□□□□ -0.75
MSH5-213ENST00000468136 TMEM240Q5SV17 173 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 FAM117BQ6P1L5 589 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 PKN3Q6P5Z2 889 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 RANBP10Q6VN20 620 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms