RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 CHRNA5P30532 468 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 POLD2P49005 469 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 RHAGQ02094 409 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 FOXO1Q12778 655 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 PPFIA1Q13136 1202 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 GXYLT1Q4G148 440 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 INTS11Q5TA45 600 aaKnown RBP4.1□□□□□ -1.75
VPS50-209ENST00000467326 ZNF549Q6P9A3 640 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 SLC30A9Q6PML9 568 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 ZNF517Q6ZMY9 492 aaPredicted RBP4.1□□□□□ -1.75
VPS50-209ENST00000467326 SYNE3Q6ZMZ3 975 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 CCDC25Q86WR0 208 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 SAMD14Q8IZD0 417 aaPredicted RBP4.1□□□□□ -1.75
VPS50-209ENST00000467326 PELI3Q8N2H9 469 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 HDAC2Q92769 488 aaKnown RBP4.1□□□□□ -1.75
VPS50-209ENST00000467326 GOLGA1Q92805 767 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 TRAPPC9Q96Q05 1148 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 FRMD8Q9BZ67 464 aaPredicted RBP4.1□□□□□ -1.75
VPS50-209ENST00000467326 MRPL44Q9H9J2 332 aaKnown RBP4.1□□□□□ -1.75
VPS50-209ENST00000467326 IL21RQ9HBE5 538 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 SH3GLB2Q9NR46 395 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 SMC4Q9NTJ3 1288 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 TMLHEQ9NVH6 421 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 SAGE1Q9NXZ1 904 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 BAG5Q9UL15 447 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 DTX4Q9Y2E6 619 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 CLSPNQ9HAW4 1339 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 A0A1B0GVC2 190 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 A6NCN8 305 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 PABPN1LA6NDY0 278 aaKnown RBP4.09□□□□□ -1.75
VPS50-209ENST00000467326 FAM90A8PA6NJQ4 464 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 H0Y3Z8 333 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 HNRNPRO43390 633 aaKnown RBP4.09□□□□□ -1.75
VPS50-209ENST00000467326 TMCC2O75069 709 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 IFNA2P01563 188 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 CYP21A2P08686 494 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 IFIT1P09914 478 aaKnown RBP4.09□□□□□ -1.75
VPS50-209ENST00000467326 FAM90A13PP0C7W8 464 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 FAM90A24PP0C7X0 464 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 FAM200BP0CF97 657 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 HOXB2P14652 356 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 CHKAP35790 457 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 CLNS1AP54105 237 aaKnown RBP4.09□□□□□ -1.75
VPS50-209ENST00000467326 OAZ1P54368 228 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 NAP1L1P55209 391 aaKnown RBP4.09□□□□□ -1.75
VPS50-209ENST00000467326 P2RX3P56373 397 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 ZBTB16Q05516 673 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 CDK18Q07002 472 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 G3BP1Q13283 466 aaKnown RBP eCLIP4.09□□□□□ -1.75
VPS50-209ENST00000467326 PDCLQ13371 301 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 TIGD6Q17RP2 521 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 ENTPD8Q5MY95 495 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 ARMC3Q5W041 872 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 C1orf122Q6ZSJ8 110 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 RRAGAQ7L523 313 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 TMEM200AQ86VY9 491 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 ZDHHC17Q8IUH5 632 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 SLC25A41Q8N5S1 370 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 FAM110DQ8TAY7 271 aaPredicted RBP4.09□□□□□ -1.75
VPS50-209ENST00000467326 OTUD7AQ8TE49 926 aaPredicted RBP4.09□□□□□ -1.75
VPS50-209ENST00000467326 TMEM174Q8WUU8 243 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 ARRDC3Q96B67 414 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 NUDT16L1Q9BRJ7 211 aaKnown RBP4.09□□□□□ -1.75
VPS50-209ENST00000467326 AP1M1Q9BXS5 423 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 HDHD5Q9BXW7 423 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 RBM38Q9H0Z9 239 aaKnown RBP4.09□□□□□ -1.75
VPS50-209ENST00000467326 ABHD16BQ9H3Z7 469 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 ACTR5Q9H9F9 607 aaPredicted RBP4.09□□□□□ -1.75
VPS50-209ENST00000467326 MAP6D1Q9H9H5 199 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 RNF146Q9NTX7 359 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 TBC1D22BQ9NU19 505 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 KCND3Q9UK17 655 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 RCE1Q9Y256 329 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 PCDHGB3Q9Y5G1 929 aa4.09□□□□□ -1.75
VPS50-209ENST00000467326 ANKRD18BA2A2Z9 1011 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 NPIPB13A6NJU9 1138 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 TTC36A6NLP5 189 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 NPIPB5A8MRT5 1133 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 NPIPB4C9JG80 1138 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 MTA2O94776 668 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 BAIAP3O94812 1187 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 ALPLP05186 524 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 VEGFAP15692 232 aaPredicted RBP4.08□□□□□ -1.76
VPS50-209ENST00000467326 TYK2P29597 1187 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 CDC25AP30304 524 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 CYP2J2P51589 502 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 ALKBH1Q13686 389 aaKnown RBP4.08□□□□□ -1.76
VPS50-209ENST00000467326 TUBB8Q3ZCM7 444 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 FAM171A1Q5VUB5 890 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 SPATA1Q5VX52 437 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 RETSATQ6NUM9 610 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 FAM180BQ6P0A1 224 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 BRINP3Q76B58 766 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 IGFN1Q86VF2 1251 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 NDUFAF2Q8N183 169 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 VPS52Q8N1B4 723 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 ASB5Q8WWX0 329 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 RSPH1Q8WYR4 309 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 KCNJ9Q92806 393 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 ATP6V1E2Q96A05 226 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms