RNA–Protein interactions for RNA: ENST00000467301.1

LIMK2-208, Transcript of LIM domain kinase 2, human

TSL 3

Gene LIMK2, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LIMK2-208	ENST00000467301	SDC4	P31431	198 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	CHRNA3	P32297	505 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	STAT1	P42224	750 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	RECQL	P46063	649 aa	Predicted RBP	13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	DNA2	P51530	1060 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	COPB1	P53618	953 aa	Known RBP	13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	SYCP1	Q15431	976 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	STX1A	Q16623	288 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	AGBL4	Q5VU57	503 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	NAPEPLD	Q6IQ20	393 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	RWDD4	Q6NW29	188 aa	Known RBP	13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	SETD3	Q86TU7	594 aa	Predicted RBP	13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	ZNF683	Q8IZ20	524 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	DCAF4L2	Q8NA75	395 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	NEK11	Q8NG66	645 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	KLK6	Q92876	244 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	ELF4	Q99607	663 aa	Predicted RBP	13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	ZYG11B	Q9C0D3	744 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	ATP13A1	Q9HD20	1204 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	TMEM59L	Q9UK28	342 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	PPM1H	Q9ULR3	514 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	HS3ST2	Q9Y278	367 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	CHD6	Q8TD26	2715 aa		13.93	□□□□□ -0.18
LIMK2-208	ENST00000467301	PLXNB3	Q9ULL4	1909 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	DRGX	A6NNA5	263 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	TLR4	O00206	839 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	TNFSF14	O43557	240 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	PCDHGA12	O60330	932 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	RNGTT	O60942	597 aa	Known RBP	13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	CTSL	P07711	333 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	PRLR	P16471	622 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	CHRNB2	P17787	502 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	CDK11B	P21127	795 aa	Known RBP	13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	NSF	P46459	744 aa	Known RBP	13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	ARRB1	P49407	418 aa	Predicted RBP	13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	VASP	P50552	380 aa	Predicted RBP	13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	JAM2	P57087	298 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	FMO1	Q01740	532 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	UBXN1	Q04323	297 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	SCAP	Q12770	1279 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	ARL13B	Q3SXY8	428 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	SETMAR	Q53H47	684 aa	Predicted RBP	13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	RAB6C	Q53S08	254 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	C22orf39	Q6P5X5	142 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	DBX2	Q6ZNG2	339 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	MARCH9	Q86YJ5	346 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	RYBP	Q8N488	228 aa	Predicted RBP	13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	CHST14	Q8NCH0	376 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	RXFP2	Q8WXD0	754 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	C1orf74	Q96LT6	269 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	HAPLN3	Q96S86	360 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	RAB6C	Q9H0N0	254 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	ANO10	Q9NW15	660 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	TOR4A	Q9NXH8	423 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	TPX2	Q9ULW0	747 aa	Known RBP	13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	CA5B	Q9Y2D0	317 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	ZZEF1	O43149	2961 aa		13.92	□□□□□ -0.18
LIMK2-208	ENST00000467301	IGLV3-10	A0A075B6K4	115 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301		A0A1W2PR77	199 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	SRRM3	A6NNA2	597 aa	Predicted RBP	13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	LAT	O43561	262 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	PRNP	P04156	253 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	CYP1A1	P04798	512 aa	Predicted RBP	13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	MMP8	P22894	467 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	CLCN6	P51797	869 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	NXPH1	P58417	271 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	MYL5	Q02045	173 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	STAT4	Q14765	748 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	ARSI	Q5FYB1	569 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	RETSAT	Q6NUM9	610 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	TRIM72	Q6ZMU5	477 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	CLEC17A	Q6ZS10	378 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	TRIM69	Q86WT6	500 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	ZNF354C	Q86Y25	554 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	EID2	Q8N6I1	236 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	OR2A12	Q8NGT7	310 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	JOSD2	Q8TAC2	188 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	ARRDC3	Q96B67	414 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	CNDP2	Q96KP4	475 aa	Known RBP	13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	SELENOO	Q9BVL4	669 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	KDM4C	Q9H3R0	1056 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	PREB	Q9HCU5	417 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	TMEM51	Q9NW97	253 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	IL36A	Q9UHA7	158 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301	SIK3	Q9Y2K2	1263 aa		13.91	□□□□□ -0.18
LIMK2-208	ENST00000467301		A0A1W2PQU0	124 aa		13.9	□□□□□ -0.18
LIMK2-208	ENST00000467301	ILVBL	A1L0T0	632 aa		13.9	□□□□□ -0.18
LIMK2-208	ENST00000467301	FAM149A	A5PLN7	773 aa		13.9	□□□□□ -0.18
LIMK2-208	ENST00000467301	FAM221B	A6H8Z2	402 aa		13.9	□□□□□ -0.18
LIMK2-208	ENST00000467301	LGALS16	A8MUM7	142 aa		13.9	□□□□□ -0.18
LIMK2-208	ENST00000467301	SLC31A1	O15431	190 aa		13.9	□□□□□ -0.18
LIMK2-208	ENST00000467301	YKT6	O15498	198 aa		13.9	□□□□□ -0.18
LIMK2-208	ENST00000467301	PCDH8	O95206	1070 aa		13.9	□□□□□ -0.18
LIMK2-208	ENST00000467301	LDOC1	O95751	146 aa	Predicted RBP	13.9	□□□□□ -0.18
LIMK2-208	ENST00000467301	EPHA8	P29322	1005 aa	Predicted RBP	13.9	□□□□□ -0.18
LIMK2-208	ENST00000467301	GNA12	Q03113	381 aa		13.9	□□□□□ -0.18
LIMK2-208	ENST00000467301	CCDC15	Q0P6D6	951 aa		13.9	□□□□□ -0.18
LIMK2-208	ENST00000467301	CCDC14	Q49A88	953 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms