RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 SNRNP25Q9BV90 132 aaKnown RBP18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 CAAP1Q9H8G2 361 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 GBA2Q9HCG7 927 aaPredicted RBP18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 MAN1C1Q9NR34 630 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 ARHGAP26Q9UNA1 814 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 PLLPQ9Y342 182 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 MFHAS1Q9Y4C4 1052 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 CXorf49A8MYA2 514 aaPredicted RBP18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 AQP9O43315 295 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 KDM1AO60341 852 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 UGT1A9O60656 530 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 SNNO75324 88 aaPredicted RBP18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 SNAI1O95863 264 aaPredicted RBP18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 LCP1P13796 627 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 UGT1A6P19224 532 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 UGT1A1P22309 533 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 UGT1A4P22310 534 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 HOXA11P31270 313 aaPredicted RBP18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 UGT1A3P35503 534 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 UGT1A5P35504 534 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 INCA1Q0VD86 236 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 PRAMEF19Q5SWL8 479 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 TBC1D15Q8TC07 691 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 SERPINI1Q99574 410 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 OSMRQ99650 979 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 OSBPL10Q9BXB5 764 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 UGT1A7Q9HAW7 530 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 UGT1A10Q9HAW8 530 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 UGT1A8Q9HAW9 530 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 GOLGA2P5Q9HBQ8 144 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 LOC285556D6RIA3 1793 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 A0A1B0GTW7 788 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 CCDC195A0A1B0GUA6 201 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 E7ESA3 106 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 SMPD1P17405 629 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 GRIA1P42261 906 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 STX3Q13277 289 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 GPRC5AQ8NFJ5 357 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 PPTC7Q8NI37 304 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 PPP1R14CQ8TAE6 165 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 SLC44A1Q8WWI5 657 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 RMND5BQ96G75 393 aaPredicted RBP18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 NXF3Q9H4D5 531 aaKnown RBP18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 COPS7BQ9H9Q2 264 aaPredicted RBP18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 VTA1Q9NP79 307 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 NCKIPSDQ9NZQ3 722 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 STK39Q9UEW8 545 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 TTLL3Q9Y4R7 772 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 ANK1P16157 1881 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 H0YJX3 145 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 ENDOD1O94919 500 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 CAPNS1P04632 268 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 INHBBP09529 407 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 NDST2P52849 883 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 GBE1Q04446 702 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 TUBB3Q13509 450 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 PHKG1Q16816 387 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 ZNF792Q3KQV3 632 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 EFCAB3Q8N7B9 438 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 PPM1NQ8N819 430 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 FERMT1Q9BQL6 677 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 ZNF395Q9H8N7 513 aaPredicted RBP18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 VRTNQ9H8Y1 702 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 PNPLA3Q9NST1 481 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 THAP1Q9NVV9 213 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 B3GNT3Q9Y2A9 372 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 RNF11Q9Y3C5 154 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 SYNJ2BP-COX16A0A087WUM0 186 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 MYL4P12829 197 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 SDC4P31431 198 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 SLC10A2Q12908 348 aaPredicted RBP18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 KRT80Q6KB66 452 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 CDHR3Q6ZTQ4 885 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 PEX5LQ8IYB4 626 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 PYROXD2Q8N2H3 581 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 PCYOX1LQ8NBM8 494 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 SLC10A4Q96EP9 437 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 ZNF512Q96ME7 567 aaPredicted RBP18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 TMPRSS4Q9NRS4 437 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 COX16Q9P0S2 106 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 SLC8A2Q9UPR5 921 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 ERGIC3Q9Y282 383 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 TEX264Q9Y6I9 313 aa18.37■□□□□ 0.53
SNAPC3-205ENST00000467062 OTOFQ9HC10 1997 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 ARHGEF37A1IGU5 675 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 TMEM114B3SHH9 223 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 FOXD2O60548 495 aaPredicted RBP18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 RABGGTBP53611 331 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 BMPR2Q13873 1038 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 KCNJ11Q14654 390 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 NR1D2Q14995 579 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 C9orf131Q5VYM1 1079 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 FAM96AQ9H5X1 160 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 DHX35Q9H5Z1 703 aaKnown RBP18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 AP4S1Q9Y587 144 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 PDHXO00330 501 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 KPNA4O00629 521 aaPredicted RBP18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 MGEA5O60502 916 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 IGFBP6P24592 240 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms