RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PCDHGA7Q9Y5G6 932 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 TCRBV3S1A0A5B6 114 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 TRPC5OSA6NMA1 111 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 ZNF12P17014 697 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 STX5Q13190 355 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 ZNF420Q8TAQ5 688 aaPredicted RBP20.06■□□□□ 0.8
SDF4-205ENST00000465727 PBXIP1Q96AQ6 731 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 SGF29Q96ES7 293 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 KCTD15Q96SI1 283 aaPredicted RBP20.06■□□□□ 0.8
SDF4-205ENST00000465727 C11orf84Q9BUA3 381 aaPredicted RBP20.06■□□□□ 0.8
SDF4-205ENST00000465727 SEMA6AQ9H2E6 1030 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 ACAD9Q9H845 621 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 PIH1D1Q9NWS0 290 aaKnown RBP20.06■□□□□ 0.8
SDF4-205ENST00000465727 SARDHQ9UL12 918 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 PAPSS1O43252 624 aaPredicted RBP20.06■□□□□ 0.8
SDF4-205ENST00000465727 SUPT3HO75486 399 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 TCN1P20061 433 aaPredicted RBP20.06■□□□□ 0.8
SDF4-205ENST00000465727 PSMB4P28070 264 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 ARL4AP40617 200 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 RGS7P49802 495 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 TRIP11Q15643 1979 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 KIZQ2M2Z5 673 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 GOLGA7BQ2TAP0 167 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 NHSL2Q5HYW2 709 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 TMEM198Q66K66 360 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 ELMSAN1Q6PJG2 1045 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 CLVS1Q8IUQ0 354 aaPredicted RBP20.06■□□□□ 0.8
SDF4-205ENST00000465727 MYO1HQ8N1T3 1032 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 PACRGLQ8N7B6 248 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 ANKFN1Q8N957 763 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 GIPC3Q8TF64 312 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 AKT1S1Q96B36 256 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 ZNF669Q96BR6 464 aaPredicted RBP20.06■□□□□ 0.8
SDF4-205ENST00000465727 MAELQ96JY0 434 aaKnown RBP20.06■□□□□ 0.8
SDF4-205ENST00000465727 COX4I2Q96KJ9 171 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 PPP1R36Q96LQ0 422 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 FCRL3Q96P31 734 aaPredicted RBP20.06■□□□□ 0.8
SDF4-205ENST00000465727 NPAS2Q99743 824 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 PDGFDQ9GZP0 370 aaPredicted RBP20.06■□□□□ 0.8
SDF4-205ENST00000465727 FZD8Q9H461 694 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 ZDHHC2Q9UIJ5 367 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 ZNF214Q9UL59 606 aaPredicted RBP20.06■□□□□ 0.8
SDF4-205ENST00000465727 TDRKHQ9Y2W6 561 aaKnown RBP20.06■□□□□ 0.8
SDF4-205ENST00000465727 ZNF711Q9Y462 761 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 SNX13Q9Y5W8 968 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 USP3Q9Y6I4 520 aa20.06■□□□□ 0.8
SDF4-205ENST00000465727 TANC1Q9C0D5 1861 aa20.05■□□□□ 0.8
SDF4-205ENST00000465727 HEATR9A2RTY3 570 aa20.05■□□□□ 0.8
SDF4-205ENST00000465727 ZNF829Q3KNS6 432 aaPredicted RBP20.05■□□□□ 0.8
SDF4-205ENST00000465727 PPP4R4Q6NUP7 873 aa20.05■□□□□ 0.8
SDF4-205ENST00000465727 PMF1Q6P1K2 205 aa20.05■□□□□ 0.8
SDF4-205ENST00000465727 HERC6Q8IVU3 1022 aa20.05■□□□□ 0.8
SDF4-205ENST00000465727 P2RY11Q96G91 374 aa20.05■□□□□ 0.8
SDF4-205ENST00000465727 ATXN7L3BQ96GX2 97 aa20.05■□□□□ 0.8
SDF4-205ENST00000465727 HPDLQ96IR7 371 aa20.05■□□□□ 0.8
SDF4-205ENST00000465727 LGMNQ99538 433 aa20.05■□□□□ 0.8
SDF4-205ENST00000465727 CDT1Q9H211 546 aa20.05■□□□□ 0.8
SDF4-205ENST00000465727 ITGB1BP2Q9UKP3 347 aa20.05■□□□□ 0.8
SDF4-205ENST00000465727 TNFSF13BQ9Y275 285 aa20.05■□□□□ 0.8
SDF4-205ENST00000465727 HEMK1Q9Y5R4 338 aaPredicted RBP20.05■□□□□ 0.8
SDF4-205ENST00000465727 RLFQ13129 1914 aa20.05■□□□□ 0.8
SDF4-205ENST00000465727 PHIPQ8WWQ0 1821 aa20.05■□□□□ 0.8
SDF4-205ENST00000465727 TRIM24O15164 1050 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 STAU1O95793 577 aaKnown RBP20.04■□□□□ 0.8
SDF4-205ENST00000465727 CSRP3P50461 194 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 IFRD2Q12894 506 aaPredicted RBP20.04■□□□□ 0.8
SDF4-205ENST00000465727 MPP3Q13368 585 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 TMEM132AQ24JP5 1023 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 ANO4Q32M45 955 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 PKDCCQ504Y2 493 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 MTX3Q5HYI7 312 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 CES3Q6UWW8 571 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 ZSCAN18Q8TBC5 510 aaPredicted RBP20.04■□□□□ 0.8
SDF4-205ENST00000465727 ADAM32Q8TC27 787 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 TFAP2CQ92754 450 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 C12orf43Q96C57 262 aaKnown RBP20.04■□□□□ 0.8
SDF4-205ENST00000465727 MCMBPQ9BTE3 642 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 TASP1Q9H6P5 420 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 BFARQ9NZS9 450 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 TRIM64A6NGJ6 449 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 F5H423 210 aaPredicted RBP20.04■□□□□ 0.8
SDF4-205ENST00000465727 DDHD2O94830 711 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 CSPG5O95196 566 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 SCNN1AP37088 669 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 MAGEA10P43363 369 aaPredicted RBP20.04■□□□□ 0.8
SDF4-205ENST00000465727 NAA20P61599 178 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 PFKPQ01813 784 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 DLG2Q15700 870 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 JADE1Q6IE81 842 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 ZBTB49Q6ZSB9 765 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 TMEM151AQ8N4L1 468 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 FAM156AQ8NDB6 213 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 ASB7Q9H672 318 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 CAB39LQ9H9S4 337 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 NSMCE4AQ9NXX6 385 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 TUBGCP4Q9UGJ1 667 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 TLK1Q9UKI8 766 aa20.04■□□□□ 0.8
SDF4-205ENST00000465727 LCTP09848 1927 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 ZCWPW2A0A1B0GU75 182 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 LACTBL1A8MY62 500 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms