RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 OR2T34Q8NGX1 318 aa22.29■■□□□ 1.16
LIME1-203ENST00000465591 OR14C36Q8NHC7 312 aa22.29■■□□□ 1.16
LIME1-203ENST00000465591 PIP4K2CQ8TBX8 421 aa22.29■■□□□ 1.16
LIME1-203ENST00000465591 CAMK1GQ96NX5 476 aa22.29■■□□□ 1.16
LIME1-203ENST00000465591 SPON2Q9BUD6 331 aa22.29■■□□□ 1.16
LIME1-203ENST00000465591 OSGEPQ9NPF4 335 aa22.29■■□□□ 1.16
LIME1-203ENST00000465591 FNDC3AQ9Y2H6 1198 aaKnown RBP22.29■■□□□ 1.16
LIME1-203ENST00000465591 EPG5Q9HCE0 2579 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 SPAARA0A1B0GVQ0 90 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 LRRC72A6NJI9 287 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 CBX4O00257 560 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 WNT9AO14904 365 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 RTN2O75298 545 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 ZNF821O75541 412 aaPredicted RBP22.28■■□□□ 1.16
LIME1-203ENST00000465591 PLEKP08567 350 aaPredicted RBP22.28■■□□□ 1.16
LIME1-203ENST00000465591 CCDC172P0C7W6 258 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 PTMSP20962 102 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 ACVRL1P37023 503 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 AFF3P51826 1226 aaKnown RBP22.28■■□□□ 1.16
LIME1-203ENST00000465591 ZNF143P52747 638 aaPredicted RBP22.28■■□□□ 1.16
LIME1-203ENST00000465591 PPP2CBP62714 309 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 PPP2CAP67775 309 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 ARF5P84085 180 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 GNA12Q03113 381 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 SFSWAPQ12872 951 aaKnown RBP22.28■■□□□ 1.16
LIME1-203ENST00000465591 ASIC2Q16515 512 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 HLA-BQ31612 363 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 RWDD4Q6NW29 188 aaKnown RBP22.28■■□□□ 1.16
LIME1-203ENST00000465591 LRSAM1Q6UWE0 723 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 ZNF571Q7Z3V5 609 aaPredicted RBP22.28■■□□□ 1.16
LIME1-203ENST00000465591 CHST14Q8NCH0 376 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 NTAN1Q96AB6 310 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 SLC6A18Q96N87 628 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 TNKS2Q9H2K2 1166 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 HAUS4Q9H6D7 363 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 GAREM1Q9H706 876 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 AIPL1Q9NZN9 384 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 SNX11Q9Y5W9 270 aa22.28■■□□□ 1.16
LIME1-203ENST00000465591 A0A1W2PPC4 97 aa22.27■■□□□ 1.16
LIME1-203ENST00000465591 ALOX15BO15296 676 aa22.27■■□□□ 1.16
LIME1-203ENST00000465591 ATMINO43313 823 aaPredicted RBP22.27■■□□□ 1.16
LIME1-203ENST00000465591 SH3BP5O60239 455 aa22.27■■□□□ 1.16
LIME1-203ENST00000465591 CD160O95971 181 aa22.27■■□□□ 1.16
LIME1-203ENST00000465591 TOP3BO95985 862 aaKnown RBP22.27■■□□□ 1.16
LIME1-203ENST00000465591 SERPINC1P01008 464 aa22.27■■□□□ 1.16
LIME1-203ENST00000465591 GRIA4P48058 902 aa22.27■■□□□ 1.16
LIME1-203ENST00000465591 SCAPQ12770 1279 aa22.27■■□□□ 1.16
LIME1-203ENST00000465591 CNTN1Q12860 1018 aa22.27■■□□□ 1.16
LIME1-203ENST00000465591 AGBL4Q5VU57 503 aa22.27■■□□□ 1.16
LIME1-203ENST00000465591 C22orf39Q6P5X5 142 aa22.27■■□□□ 1.16
LIME1-203ENST00000465591 ZNF783Q6ZMS7 281 aa22.27■■□□□ 1.16
LIME1-203ENST00000465591 DSG4Q86SJ6 1040 aa22.27■■□□□ 1.16
LIME1-203ENST00000465591 SLC32A1Q9H598 525 aa22.27■■□□□ 1.16
LIME1-203ENST00000465591 ATP13A1Q9HD20 1204 aa22.27■■□□□ 1.16
LIME1-203ENST00000465591 DNAI1Q9UI46 699 aa22.27■■□□□ 1.16
LIME1-203ENST00000465591 DDX3XO00571 662 aaKnown RBP eCLIP22.26■■□□□ 1.15
LIME1-203ENST00000465591 KCNK3O14649 394 aa22.26■■□□□ 1.15
LIME1-203ENST00000465591 WNT1P04628 370 aa22.26■■□□□ 1.15
LIME1-203ENST00000465591 RHOQP17081 205 aa22.26■■□□□ 1.15
LIME1-203ENST00000465591 PRKCIP41743 596 aa22.26■■□□□ 1.15
LIME1-203ENST00000465591 CCR5P51681 352 aa22.26■■□□□ 1.15
LIME1-203ENST00000465591 FANCCQ00597 558 aa22.26■■□□□ 1.15
LIME1-203ENST00000465591 SFMBT2Q5VUG0 894 aa22.26■■□□□ 1.15
LIME1-203ENST00000465591 SLFN11Q7Z7L1 901 aa22.26■■□□□ 1.15
LIME1-203ENST00000465591 TBC1D31Q96DN5 1066 aa22.26■■□□□ 1.15
LIME1-203ENST00000465591 CNPY3Q9BT09 278 aa22.26■■□□□ 1.15
LIME1-203ENST00000465591 ACE2Q9BYF1 805 aaPredicted RBP22.26■■□□□ 1.15
LIME1-203ENST00000465591 TMEM248Q9NWD8 314 aa22.26■■□□□ 1.15
LIME1-203ENST00000465591 WASF3Q9UPY6 502 aa22.26■■□□□ 1.15
LIME1-203ENST00000465591 ANKRD6Q9Y2G4 727 aa22.26■■□□□ 1.15
LIME1-203ENST00000465591 PLRG1O43660 514 aaKnown RBP22.25■■□□□ 1.15
LIME1-203ENST00000465591 SKILP12757 684 aa22.25■■□□□ 1.15
LIME1-203ENST00000465591 CHRNA3P32297 505 aa22.25■■□□□ 1.15
LIME1-203ENST00000465591 PBX1P40424 430 aa22.25■■□□□ 1.15
LIME1-203ENST00000465591 SERPINH1P50454 418 aaKnown RBP22.25■■□□□ 1.15
LIME1-203ENST00000465591 CLCN6P51797 869 aa22.25■■□□□ 1.15
LIME1-203ENST00000465591 TAS2R38P59533 333 aa22.25■■□□□ 1.15
LIME1-203ENST00000465591 SLC14A1Q13336 389 aa22.25■■□□□ 1.15
LIME1-203ENST00000465591 MAMLD1Q13495 774 aa22.25■■□□□ 1.15
LIME1-203ENST00000465591 FAM46CQ5VWP2 391 aa22.25■■□□□ 1.15
LIME1-203ENST00000465591 SCYL2Q6P3W7 929 aa22.25■■□□□ 1.15
LIME1-203ENST00000465591 ARHGEF2Q92974 986 aaKnown RBP22.25■■□□□ 1.15
LIME1-203ENST00000465591 ARRDC3Q96B67 414 aa22.25■■□□□ 1.15
LIME1-203ENST00000465591 ANGPTL2Q9UKU9 493 aa22.25■■□□□ 1.15
LIME1-203ENST00000465591 FCF1Q9Y324 198 aaKnown RBP22.25■■□□□ 1.15
LIME1-203ENST00000465591 TBC1D3DA0A087WVF3 549 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 TBC1D3IA0A087WXS9 549 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 TBC1D3EA0A087X179 549 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 TBC1D3KA0A087X1G2 549 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 TBC1D3FA6NER0 549 aaPredicted RBP22.24■■□□□ 1.15
LIME1-203ENST00000465591 TBC1D3LB9A6J9 549 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 C1QTNF3-AMACRE9PGA6 284 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 LATO43561 262 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 CER1O95813 267 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 TBC1D3HP0C7X1 549 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 SPINK2P20155 84 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 MAPKAPK2P49137 400 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 RACK1P63244 317 aaKnown RBP22.24■■□□□ 1.15
LIME1-203ENST00000465591 SIM1P81133 766 aaPredicted RBP22.24■■□□□ 1.15
LIME1-203ENST00000465591 SHC2P98077 582 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms