RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 COX4I1P13073 169 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 SP100P23497 879 aaPredicted RBP18.64■□□□□ 0.57
SYNE4-204ENST00000465425 PRDX6P30041 224 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 PEX19P40855 299 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 PSEN1P49768 467 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 AFF1P51825 1210 aaKnown RBP18.64■□□□□ 0.57
SYNE4-204ENST00000465425 USP10Q14694 798 aaKnown RBP18.64■□□□□ 0.57
SYNE4-204ENST00000465425 GRM3Q14832 879 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 GSTA3Q16772 222 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 FRMD7Q6ZUT3 714 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 C3orf58Q8NDZ4 430 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 ACVR1CQ8NER5 493 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 GPR22Q99680 433 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 PTPN18Q99952 460 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 GATA5Q9BWX5 397 aaPredicted RBP18.64■□□□□ 0.57
SYNE4-204ENST00000465425 RHOBTB2Q9BYZ6 727 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 CPA4Q9UI42 421 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 AAR2Q9Y312 384 aaKnown RBP18.64■□□□□ 0.57
SYNE4-204ENST00000465425 ZNF236Q9UL36 1845 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 CASTOR2A6NHX0 329 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.63■□□□□ 0.57
SYNE4-204ENST00000465425 TK2O00142 265 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 ASPHQ12797 758 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 PEX6Q13608 980 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 OTOP3Q7RTS5 596 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 TAC4Q86UU9 113 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 SHKBP1Q8TBC3 707 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 RDH11Q8TC12 318 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 LPPQ93052 612 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 SCYL1Q96KG9 808 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 ECSITQ9BQ95 431 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 RHOJQ9H4E5 214 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 ITGAXP20702 1163 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 CRABP2P29373 138 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 TBL3Q12788 808 aaKnown RBP18.63■□□□□ 0.57
SYNE4-204ENST00000465425 KLF10Q13118 480 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 MORN1Q5T089 497 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 LIPMQ5VYY2 423 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 PM20D1Q6GTS8 502 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 BHLHA9Q7RTU4 235 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 ZC3HC1Q86WB0 502 aaKnown RBP18.63■□□□□ 0.57
SYNE4-204ENST00000465425 IRGQQ8WZA9 623 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 MYLPFQ96A32 169 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 KIFC1Q9BW19 673 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 SIK2Q9H0K1 926 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 ST3GAL5Q9UNP4 418 aa18.63■□□□□ 0.57
SYNE4-204ENST00000465425 ZBTB14O43829 449 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 ZMPSTE24O75844 475 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 MRPS6P82932 125 aaKnown RBP18.62■□□□□ 0.57
SYNE4-204ENST00000465425 ZNF33AQ06730 810 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 PGM2L1Q6PCE3 622 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 ADGRG6Q86SQ4 1221 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 DHDDSQ86SQ9 333 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 ATPAF2Q8N5M1 289 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 MAPK15Q8TD08 544 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 MCMBPQ9BTE3 642 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 SLC24A3Q9HC58 644 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 CSNK1G1Q9HCP0 422 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 RAP2CQ9Y3L5 183 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 ARL5CA6NH57 179 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 PHGDHO43175 533 aaKnown RBP18.62■□□□□ 0.57
SYNE4-204ENST00000465425 CHRNGP07510 517 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 BDNFP23560 247 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 GRIA4P48058 902 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 SCNN1GP51170 649 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 BTKQ06187 659 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 SLC12A1Q13621 1099 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 FSCN1Q16658 493 aaKnown RBP18.62■□□□□ 0.57
SYNE4-204ENST00000465425 UGP2Q16851 508 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 SEL1L3Q68CR1 1132 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 ZYG11AQ6WRX3 759 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 CNTD1Q8N815 330 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 SPATA22Q8NHS9 363 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 RTKNQ9BST9 563 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 VCX3BQ9H321 246 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 MIOSQ9NXC5 875 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 SSX2IPQ9Y2D8 614 aa18.62■□□□□ 0.57
SYNE4-204ENST00000465425 GOLGA8QA0A0J9YX86 632 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 GOLGA8OA6NCC3 632 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 GLTPD2A6NH11 291 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 GOLGA8NF8WBI6 632 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 HDAC3O15379 428 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 ODC1P11926 461 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 SERPINB5P36952 375 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 AVPR1AP37288 418 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 GLRBP48167 497 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 RPL14P50914 215 aaKnown RBP18.61■□□□□ 0.57
SYNE4-204ENST00000465425 CDC16Q13042 620 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 POU6F1Q14863 301 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 CCL14Q16627 93 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 PCID2Q5JVF3 399 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 TCHHL1Q5QJ38 904 aaPredicted RBP18.61■□□□□ 0.57
SYNE4-204ENST00000465425 SPRYD7Q5W111 196 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 HPS6Q86YV9 775 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 FBXW8Q8N3Y1 598 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 HIPK4Q8NE63 616 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 GATA6Q92908 595 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 PPP1R36Q96LQ0 422 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 OR52B2Q96RD2 323 aa18.61■□□□□ 0.57
SYNE4-204ENST00000465425 NR1H4Q96RI1 486 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms