RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 TCEAL1Q15170 157 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 MAP7D1Q3KQU3 841 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 TTC31Q49AM3 519 aaPredicted RBP12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 LAIR1Q6GTX8 287 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 C22orf39Q6P5X5 142 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 TMCO3Q6UWJ1 677 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 SLC36A4Q6YBV0 504 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 LEKR1Q6ZMV7 388 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 Q6ZVU0 165 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 POLNQ7Z5Q5 900 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 DSG4Q86SJ6 1040 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 KBTBD6Q86V97 674 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 TMEM139Q8IV31 216 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 MMAAQ8IVH4 418 aaKnown RBP12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 MAP7D3Q8IWC1 876 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 UMODL1-AS1Q8N2C9 162 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 STK40Q8N2I9 435 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 FRMD1Q8N878 549 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 SUMF1Q8NBK3 374 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 OR8D1Q8WZ84 308 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 ANP32BQ92688 251 aaKnown RBP12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 PTPRN2Q92932 1015 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 HMCESQ96FZ2 354 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 CSPG4P5Q96PW8 444 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 RSPH9Q9H1X1 276 aaPredicted RBP12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 CD93Q9NPY3 652 aa12.29□□□□□ -0.44
RPUSD3-211ENST00000464783 USP34Q70CQ2 3546 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 TNRC6BQ9UPQ9 1833 aaKnown RBP12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 IGHV1OR15-9A0A0B4J2B8 117 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 SMAD6O43541 496 aaKnown RBP12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 ZMPSTE24O75844 475 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 BCKDHBP21953 392 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 OXTRP30559 389 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 MRE11P49959 708 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 TPMTP51580 245 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 VAV2P52735 878 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 HADHBP55084 474 aaKnown RBP12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 RPL6Q02878 288 aaKnown RBP12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 ZBTB16Q05516 673 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 SFSWAPQ12872 951 aaKnown RBP12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 DPYSQ14117 519 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 DPYSL3Q14195 570 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 PDK2Q15119 407 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 CST6Q15828 149 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 ATP13A4Q4VNC1 1196 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 LPCAT2Q7L5N7 544 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 ASCL5Q7RTU5 278 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 DAAM2Q86T65 1068 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 METTL3Q86U44 580 aaKnown RBP12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 FAM124AQ86V42 546 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 RHOT1Q8IXI2 618 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 RYBPQ8N488 228 aaPredicted RBP12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 LZTR1Q8N653 840 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 CCDC112Q8NEF3 446 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 FRS2Q8WU20 508 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 DESI2Q9BSY9 194 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 CEP44Q9C0F1 390 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 SLC39A8Q9C0K1 460 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 DUSP15Q9H1R2 295 aaPredicted RBP12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 TNKS2Q9H2K2 1166 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 NOL6Q9H6R4 1146 aaKnown RBP12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 SP110Q9HB58 689 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 ITM2CQ9NQX7 267 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 RCOR3Q9P2K3 495 aaPredicted RBP12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 NCKAP1Q9Y2A7 1128 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 FCF1Q9Y324 198 aaKnown RBP12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 REXO2Q9Y3B8 237 aaKnown RBP12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 HYOU1Q9Y4L1 999 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 ABCA7Q8IZY2 2146 aa12.28□□□□□ -0.44
RPUSD3-211ENST00000464783 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 CXorf51AA0A1B0GTR3 108 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 LRRD1A4D1F6 860 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 C1QTNF3-AMACRE9PGA6 284 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 ALOX15BO15296 676 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 MID1O15344 667 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 BUB1BO60566 1050 aaPredicted RBP12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 ADH1BP00325 375 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 KRT1P04264 644 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 CD48P09326 243 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 COMTP21964 271 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 CD6P30203 668 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 SLC8A1P32418 973 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 SERPINB6P35237 376 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 DHPSP49366 369 aaPredicted RBP12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 PAPOLAP51003 745 aaKnown RBP12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 KIF5AQ12840 1032 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 MMRN1Q13201 1228 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 SERINC3Q13530 473 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 PLK5Q496M5 336 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 FAM46CQ5VWP2 391 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 ARMCX6Q7L4S7 300 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 ALYREFQ86V81 257 aaKnown RBP12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 TMEFF1Q8IYR6 380 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 PCDH20Q8N6Y1 951 aaKnown RBP12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 NPWQ8N729 165 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 NETO2Q8NC67 525 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 ZC3H10Q96K80 434 aaKnown RBP12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 CALR3Q96L12 384 aaKnown RBP12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 FAM129BQ96TA1 746 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 OMDQ99983 421 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms