RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 PTGR1Q14914 329 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 PRTGQ2VWP7 1150 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 TMEM95Q3KNT9 176 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 Q5PR19 223 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 AWAT2Q6E213 333 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 HMBOX1Q6NT76 420 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 GJB7Q6PEY0 223 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 PARM1Q6UWI2 310 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 BBS12Q6ZW61 710 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 ZNF354CQ86Y25 554 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 ZDHHC23Q8IYP9 409 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 MYRIPQ8NFW9 859 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 HERVK_113Q902F9 699 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 ZNF333Q96JL9 665 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 FAM234AQ9H0X4 552 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 TBC1D14Q9P2M4 693 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 C17orf102A2RUQ5 167 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 PLEKHD1A6NEE1 506 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 C17orf100A8MU93 164 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 H3BNX3 289 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 ANP32CO43423 234 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 DHX16O60231 1041 aaKnown RBP6.41□□□□□ -1.38
PTCD3-205ENST00000464541 UNGP13051 313 aaPredicted RBP6.41□□□□□ -1.38
PTCD3-205ENST00000464541 UBE3AQ05086 875 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 SLC12A1Q13621 1099 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 CYP26C1Q6V0L0 522 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 WDR5BQ86VZ2 330 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 KDM1BQ8NB78 822 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 NSMCE1Q8WV22 266 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 B3GNT4Q9C0J1 378 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 MYH16Q9H6N6 1097 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 RIC8AQ9NPQ8 531 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 GRHL1Q9NZI5 618 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 ICKQ9UPZ9 632 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 CLDN16Q9Y5I7 305 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 SQORQ9Y6N5 450 aa6.41□□□□□ -1.38
PTCD3-205ENST00000464541 OR6C68A6NDL8 312 aa6.4□□□□□ -1.38
PTCD3-205ENST00000464541 TNFSF8P32971 234 aa6.4□□□□□ -1.38
PTCD3-205ENST00000464541 RAPGEF1Q13905 1077 aa6.4□□□□□ -1.38
PTCD3-205ENST00000464541 TAF12Q16514 161 aa6.4□□□□□ -1.38
PTCD3-205ENST00000464541 ZNF260Q3ZCT1 412 aa6.4□□□□□ -1.38
PTCD3-205ENST00000464541 LRRTM4Q86VH4 590 aa6.4□□□□□ -1.38
PTCD3-205ENST00000464541 GPSM1Q86YR5 675 aa6.4□□□□□ -1.38
PTCD3-205ENST00000464541 SMAP1Q8IYB5 467 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-205ENST00000464541 CMASQ8NFW8 434 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-205ENST00000464541 RNFT2Q96EX2 444 aa6.4□□□□□ -1.38
PTCD3-205ENST00000464541 REEP2Q9BRK0 252 aa6.4□□□□□ -1.38
PTCD3-205ENST00000464541 CTDSP1Q9GZU7 261 aa6.4□□□□□ -1.38
PTCD3-205ENST00000464541 TTC12Q9H892 705 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-205ENST00000464541 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.4□□□□□ -1.38
PTCD3-205ENST00000464541 EIF3FO00303 357 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-205ENST00000464541 WEE2P0C1S8 567 aa6.39□□□□□ -1.39
PTCD3-205ENST00000464541 CPA1P15085 419 aa6.39□□□□□ -1.39
PTCD3-205ENST00000464541 HNF1BP35680 557 aa6.39□□□□□ -1.39
PTCD3-205ENST00000464541 POLGP54098 1239 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-205ENST00000464541 PKP1Q13835 747 aa6.39□□□□□ -1.39
PTCD3-205ENST00000464541 IL13RA2Q14627 380 aa6.39□□□□□ -1.39
PTCD3-205ENST00000464541 DAB2IPQ5VWQ8 1189 aa6.39□□□□□ -1.39
PTCD3-205ENST00000464541 NUGGCQ68CJ6 796 aa6.39□□□□□ -1.39
PTCD3-205ENST00000464541 NCAPH2Q6IBW4 605 aa6.39□□□□□ -1.39
PTCD3-205ENST00000464541 TECPR1Q7Z6L1 1165 aa6.39□□□□□ -1.39
PTCD3-205ENST00000464541 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-205ENST00000464541 TMC8Q8IU68 726 aa6.39□□□□□ -1.39
PTCD3-205ENST00000464541 FAM217AQ8IXS0 508 aa6.39□□□□□ -1.39
PTCD3-205ENST00000464541 EXOC8Q8IYI6 725 aa6.39□□□□□ -1.39
PTCD3-205ENST00000464541 TMEM199Q8N511 208 aa6.39□□□□□ -1.39
PTCD3-205ENST00000464541 UBXN10Q96LJ8 280 aa6.39□□□□□ -1.39
PTCD3-205ENST00000464541 SIRT3Q9NTG7 399 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-205ENST00000464541 CD8B2A6NJW9 211 aa6.38□□□□□ -1.39
PTCD3-205ENST00000464541 KLK10O43240 276 aa6.38□□□□□ -1.39
PTCD3-205ENST00000464541 CRYABP02511 175 aaKnown RBP6.38□□□□□ -1.39
PTCD3-205ENST00000464541 MMP3P08254 477 aa6.38□□□□□ -1.39
PTCD3-205ENST00000464541 YWHAQP27348 245 aa6.38□□□□□ -1.39
PTCD3-205ENST00000464541 KCNJ4P48050 445 aa6.38□□□□□ -1.39
PTCD3-205ENST00000464541 PGGT1BP53609 377 aa6.38□□□□□ -1.39
PTCD3-205ENST00000464541 TLE2Q04725 743 aa6.38□□□□□ -1.39
PTCD3-205ENST00000464541 CHRNDQ07001 517 aa6.38□□□□□ -1.39
PTCD3-205ENST00000464541 AP5B1Q2VPB7 878 aa6.38□□□□□ -1.39
PTCD3-205ENST00000464541 WDR45BQ5MNZ6 344 aa6.38□□□□□ -1.39
PTCD3-205ENST00000464541 LVRNQ6Q4G3 990 aa6.38□□□□□ -1.39
PTCD3-205ENST00000464541 SETD9Q8NE22 299 aa6.38□□□□□ -1.39
PTCD3-205ENST00000464541 GABPB2Q8TAK5 448 aaPredicted RBP6.38□□□□□ -1.39
PTCD3-205ENST00000464541 INPP5DQ92835 1189 aa6.38□□□□□ -1.39
PTCD3-205ENST00000464541 USP13Q92995 863 aaPredicted RBP6.38□□□□□ -1.39
PTCD3-205ENST00000464541 CD180Q99467 661 aa6.38□□□□□ -1.39
PTCD3-205ENST00000464541 STN1Q9H668 368 aaKnown RBP6.38□□□□□ -1.39
PTCD3-205ENST00000464541 RAP2CQ9Y3L5 183 aa6.38□□□□□ -1.39
PTCD3-205ENST00000464541 PEX12O00623 359 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 P2RX3P56373 397 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 KRTAP10-11P60412 298 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 VAMP2P63027 116 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 RPE65Q16518 533 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 SYTL3Q4VX76 610 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 NAA35Q5VZE5 725 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 TBC1D9BQ66K14 1250 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 SLC16A12Q6ZSM3 486 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 SERPINA11Q86U17 422 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 CPOQ8IVL8 374 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 LRRC57Q8N9N7 239 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 ZBTB9Q96C00 473 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms