RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SERINC3Q13530 473 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 DPYSL3Q14195 570 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 MAP7D1Q3KQU3 841 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 LRRC38Q5VT99 294 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 PRR23BQ6ZRT6 265 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 RHOT1Q8IXI2 618 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 STK40Q8N2I9 435 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 LZTR1Q8N653 840 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 TPCN2Q8NHX9 752 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 SPACA7Q96KW9 195 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 FAM129BQ96TA1 746 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 CALN1Q9BXU9 219 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 SLC39A8Q9C0K1 460 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 KLC2Q9H0B6 622 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 ITM2CQ9NQX7 267 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 KLHL11Q9NVR0 708 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 WDR87Q6ZQQ6 2873 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 ZSCAN5CA6NGD5 496 aaPredicted RBP14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 ARHGAP42A6NI28 874 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 ARHGAP6O43182 974 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 CD160O95971 181 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 TNNT1P13805 278 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 KDELR1P24390 212 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 ZBTB16Q05516 673 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 KIF5AQ12840 1032 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 MMRN1Q13201 1228 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 ELAVL3Q14576 367 aaKnown RBP14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 AFMIDQ63HM1 303 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 ZNF776Q68DI1 518 aaPredicted RBP14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 C11orf63Q6NUN7 778 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 TMCO3Q6UWJ1 677 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 Q6ZVU0 165 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 C11orf74Q86VG3 221 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 CACUL1Q86Y37 369 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 MMAAQ8IVH4 418 aaKnown RBP14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 ARHGAP12Q8IWW6 846 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 FAM160A2Q8N612 972 aaPredicted RBP14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 NPWQ8N729 165 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 FRMD1Q8N878 549 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 SUMF1Q8NBK3 374 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 RAPGEF5Q92565 580 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 ANP32BQ92688 251 aaKnown RBP14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 ZNF670Q9BS34 389 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 CEP44Q9C0F1 390 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 ETNK2Q9NVF9 386 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 USP36Q9P275 1121 aaKnown RBP14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 RAB23Q9ULC3 237 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 CYP8B1Q9UNU6 501 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 FARP1Q9Y4F1 1045 aaPredicted RBP14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 ACTL7AQ9Y615 435 aa14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 ZFHX2Q9C0A1 2572 aaPredicted RBP14.81□□□□□ -0.04
SQSTM1-205ENST00000464493 DFFAO00273 331 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 MCF2LO15068 1137 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 MAP3K13O43283 966 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 BNIP3LO60238 219 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 DNTTP04053 509 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 PLA2G5P39877 138 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 PAPOLAP51003 745 aaKnown RBP14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 TPMTP51580 245 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 ODF2Q5BJF6 829 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 ANKRD20A8PQ5CZ79 823 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 C22orf39Q6P5X5 142 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 LEKR1Q6ZMV7 388 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 DAAM2Q86T65 1068 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 KBTBD6Q86V97 674 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 NETO2Q8NC67 525 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 OR8D1Q8WZ84 308 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 ZC3H10Q96K80 434 aaKnown RBP14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 CCDC114Q96M63 670 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 GOLPH3Q9H4A6 298 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 DDX56Q9NY93 547 aaKnown RBP14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 MBD1Q9UIS9 605 aaPredicted RBP14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 SMG5Q9UPR3 1016 aaKnown RBP14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 FCF1Q9Y324 198 aaKnown RBP14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 MFHAS1Q9Y4C4 1052 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 ADGRG1Q9Y653 693 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 ABCA7Q8IZY2 2146 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 SPAG17Q6Q759 2223 aa14.8□□□□□ -0.04
SQSTM1-205ENST00000464493 IGHV1OR15-9A0A0B4J2B8 117 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 LRRD1A4D1F6 860 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 PSTPIP1O43586 416 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 NRDCO43847 1150 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 ZNF821O75541 412 aaPredicted RBP14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 RHOBTB1O94844 696 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 IL1BP01584 269 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 BCKDHBP21953 392 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 OXTRP30559 389 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 SERPINB6P35237 376 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 RECQLP46063 649 aaPredicted RBP14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 DNA2P51530 1060 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 SFSWAPQ12872 951 aaKnown RBP14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 CST6Q15828 149 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 LPAL2Q16609 132 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 IFI16Q16666 785 aaKnown RBP14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 PLK5Q496M5 336 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 TTC31Q49AM3 519 aaPredicted RBP14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 INO80DQ53TQ3 878 aaPredicted RBP14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 SLC36A4Q6YBV0 504 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 DSG4Q86SJ6 1040 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 PCDH20Q8N6Y1 951 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms