RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 ALDH7A1P49419 539 aaKnown RBP4.48□□□□□ -1.69
CLK1-208ENST00000464454 BYSLQ13895 437 aaKnown RBP4.48□□□□□ -1.69
CLK1-208ENST00000464454 CAMK1Q14012 370 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 GXYLT1Q4G148 440 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 MIDNQ504T8 468 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 SLC9C2Q5TAH2 1124 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 FAAH2Q6GMR7 532 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 ACAD10Q6JQN1 1059 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 RTL10Q7L3V2 364 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 GALNT7Q86SF2 657 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 SCARB1Q8WTV0 552 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 IGFBPL1Q8WX77 278 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 CENPIQ92674 756 aaPredicted RBP4.48□□□□□ -1.69
CLK1-208ENST00000464454 RNF125Q96EQ8 232 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 WDR83Q9BRX9 315 aaKnown RBP4.48□□□□□ -1.69
CLK1-208ENST00000464454 CTDSP1Q9GZU7 261 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 ACAD9Q9H845 621 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 IL21RQ9HBE5 538 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 THSD1Q9NS62 852 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 DECR2Q9NUI1 292 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 POT1Q9NUX5 634 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 ARL15Q9NXU5 204 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 HEY2Q9UBP5 337 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 LAMP3Q9UQV4 416 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 CYP46A1Q9Y6A2 500 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 LY6G6EA0A0G2JKS1 128 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 TMEM247A6NEH6 219 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 FAM90A7PA6NKC0 464 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 FAM90A22PA8MWA6 464 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 FAM90A12PA8MX19 464 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 FAM90A23PA8MXZ1 464 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 B4E171 279 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 ZC3H11AO75152 810 aaKnown RBP eCLIP4.47□□□□□ -1.691e-16■■■□□ 18.6
CLK1-208ENST00000464454 BMP15O95972 392 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 CHRNA5P30532 468 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 HNF1BP35680 557 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 TSPAN7P41732 249 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 NR4A2P43354 598 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 CASP6P55212 293 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 GEMIN4P57678 1058 aaKnown RBP4.47□□□□□ -1.69
CLK1-208ENST00000464454 RPP30P78346 268 aaKnown RBP4.47□□□□□ -1.69
CLK1-208ENST00000464454 GALNT2Q10471 571 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 AADACL2Q6P093 401 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 PIP4P1Q86T03 277 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 IGFN1Q86VF2 1251 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 BRSK2Q8IWQ3 736 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 ZNF366Q8N895 744 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 LSM14AQ8ND56 463 aaKnown RBP4.47□□□□□ -1.69
CLK1-208ENST00000464454 FAM110DQ8TAY7 271 aaPredicted RBP4.47□□□□□ -1.69
CLK1-208ENST00000464454 ZCCHC10Q8TBK6 192 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 NOC3LQ8WTT2 800 aaKnown RBP4.47□□□□□ -1.69
CLK1-208ENST00000464454 RFFLQ8WZ73 363 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 HDAC2Q92769 488 aaKnown RBP4.47□□□□□ -1.69
CLK1-208ENST00000464454 ZUFSPQ96AP4 578 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 APOPT1Q96IL0 206 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 FUZQ9BT04 418 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 PHF7Q9BWX1 381 aaPredicted RBP4.47□□□□□ -1.69
CLK1-208ENST00000464454 NPLQ9BXD5 320 aaPredicted RBP4.47□□□□□ -1.69
CLK1-208ENST00000464454 AGXT2Q9BYV1 514 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 MROH8Q9H579 483 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 TASP1Q9H6P5 420 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 SEMA4BQ9NPR2 832 aaPredicted RBP4.47□□□□□ -1.69
CLK1-208ENST00000464454 UTS2RQ9UKP6 389 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 TNFRSF18Q9Y5U5 241 aa4.47□□□□□ -1.69
CLK1-208ENST00000464454 ITIH6Q6UXX5 1313 aa4.46□□□□□ -1.69
CLK1-208ENST00000464454 GOLGA6L10A0A0M3HER8 536 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 FOXO6A8MYZ6 492 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 TSPAN4O14817 238 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 CD4P01730 458 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 PAFAH1B1P43034 410 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 SIM2Q14190 667 aaPredicted RBP4.46□□□□□ -1.7
CLK1-208ENST00000464454 SEMA3AQ14563 771 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 NAA25Q14CX7 972 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 INPP5JQ15735 1006 aaPredicted RBP4.46□□□□□ -1.7
CLK1-208ENST00000464454 ALG10Q5BKT4 473 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 ALG10BQ5I7T1 473 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 SH2D4BQ5SQS7 431 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 MANEAQ5SRI9 462 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 C6orf10Q5SRN2 563 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 SLC30A9Q6PML9 568 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 TRAPPC11Q7Z392 1133 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 ADGRG6Q86SQ4 1221 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 PIM3Q86V86 326 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 ARMC8Q8IUR7 673 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 MMP21Q8N119 569 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 NRACQ8N912 160 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 RFWD2Q8NHY2 731 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 C2CD4CQ8TF44 421 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 ZBTB10Q96DT7 871 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 ZNF48Q96MX3 618 aaPredicted RBP4.46□□□□□ -1.7
CLK1-208ENST00000464454 CADM1Q9BY67 442 aaKnown RBP4.46□□□□□ -1.7
CLK1-208ENST00000464454 INTS2Q9H0H0 1204 aaKnown RBP4.46□□□□□ -1.7
CLK1-208ENST00000464454 FOXP1Q9H334 677 aaPredicted RBP4.46□□□□□ -1.7
CLK1-208ENST00000464454 TTC12Q9H892 705 aaPredicted RBP4.46□□□□□ -1.7
CLK1-208ENST00000464454 SMC4Q9NTJ3 1288 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 TMEM248Q9NWD8 314 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 PPP1R14DQ9NXH3 145 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 MSRB1Q9NZV6 116 aa4.46□□□□□ -1.7
CLK1-208ENST00000464454 CXorf65A6NEN9 183 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 SYF2O95926 243 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms