RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 RAD54BQ9Y620 910 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 HNRNPCL1O60812 293 aaKnown RBP10.13□□□□□ -0.79
PTPRD-207ENST00000463477 FBXO21O94952 628 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 APOEP02649 317 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 ASGR2P07307 311 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 SNRPAP09012 282 aaKnown RBP10.13□□□□□ -0.79
PTPRD-207ENST00000463477 CSH1P0DML2 217 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 CSH2P0DML3 217 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 CNTFP26441 200 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 SLC8A1P32418 973 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 NOS2P35228 1153 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 ARL4AP40617 200 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 SERPINB9P50453 376 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 NRLP54845 237 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 SARNPP82979 210 aaKnown RBP10.13□□□□□ -0.79
PTPRD-207ENST00000463477 SLC10A2Q12908 348 aaPredicted RBP10.13□□□□□ -0.79
PTPRD-207ENST00000463477 DBN1Q16643 649 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 DDR2Q16832 855 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 PPP6R3Q5H9R7 873 aaPredicted RBP10.13□□□□□ -0.79
PTPRD-207ENST00000463477 FYB2Q5VWT5 728 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 STEAP4Q687X5 459 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 NCBP2-AS2Q69YL0 99 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 POTEHQ6S545 545 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 FAM47EQ6ZV65 393 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 GAREM2Q75VX8 874 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 ZNF534Q76KX8 674 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 OTOAQ7RTW8 1153 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 CCNJLQ8IV13 435 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 SLC44A3Q8N4M1 653 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 SLC2A14Q8TDB8 520 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 CLEC4CQ8WTT0 213 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 INPP5DQ92835 1189 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 SPATA17Q96L03 361 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 SIGLEC10Q96LC7 697 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 MYRFLQ96LU7 910 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 SLC2A13Q96QE2 648 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 NPY6RQ99463 290 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 EBNA1BP2Q99848 306 aaKnown RBP10.13□□□□□ -0.79
PTPRD-207ENST00000463477 LPIN3Q9BQK8 851 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 ADAM33Q9BZ11 813 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 ZC3H7BQ9UGR2 993 aaKnown RBP10.13□□□□□ -0.79
PTPRD-207ENST00000463477 STAP1Q9ULZ2 295 aa10.13□□□□□ -0.79
PTPRD-207ENST00000463477 A0A0A0MRY4 1105 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 FAM159BA6NKW6 160 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 H3BRJ5 948 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 TROVE2P10155 538 aaKnown RBP eCLIP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 MYL4P12829 197 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 LCP1P13796 627 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 HMGA1P17096 107 aaKnown RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 NPR3P17342 541 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 TFE3P19532 575 aaPredicted RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 BDNFP23560 247 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 ADRA1DP25100 572 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 MNAT1P51948 309 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 ZNF135P52742 658 aaPredicted RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 GBE1Q04446 702 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 CDK18Q07002 472 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 SIGLEC14Q08ET2 396 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 NAB1Q13506 487 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 HTR4Q13639 388 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 PAFAH1B3Q15102 231 aaKnown RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 TAF12Q16514 161 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 PARP6Q2NL67 630 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 MDH1BQ5I0G3 518 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 HEATR6Q6AI08 1181 aaKnown RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 ZNF449Q6P9G9 518 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 PARM1Q6UWI2 310 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 TIFABQ6ZNK6 161 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 TRIM67Q6ZTA4 783 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 MTSS1LQ765P7 747 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 PIGZQ86VD9 579 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 TRIM42Q8IWZ5 723 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 GSDMBQ8TAX9 411 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 SHKBP1Q8TBC3 707 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 RAB3IL1Q8TBN0 382 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 GIPC2Q8TF65 315 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 TFB1MQ8WVM0 346 aaKnown RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 ING5Q8WYH8 240 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 FGF14Q92915 247 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 MYLPFQ96A32 169 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 NTAN1Q96AB6 310 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 KLHL29Q96CT2 875 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 SPATA13Q96N96 652 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 TMEM237Q96Q45 408 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 LRRC37BQ96QE4 947 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 FERMT1Q9BQL6 677 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 TACO1Q9BSH4 297 aaKnown RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 NAT9Q9BTE0 207 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 IL21Q9HBE4 155 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 PLAC1Q9HBJ0 212 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 SLCO1B3Q9NPD5 702 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 C11orf16Q9NQ32 467 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 SAR1AQ9NR31 198 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 RRN3Q9NYV6 651 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 DTLQ9NZJ0 730 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 CHKBQ9Y259 395 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 A0A1W2PRU2 124 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 SOBPA7XYQ1 873 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 NRG2O14511 850 aaPredicted RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 TRAFD1O14545 582 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms